Regulon of RmgR in Bacillus clausii KSM-K16
| Regulator type: | Transcription factor |
| TF locus tag: | ABC1143 |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Regulog: | RmgR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - AraC
- By pathway - Rhamnogalacturonides utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -174
Score: 5.3 Sequence: TCATTT-(13)-gCAaaT
Locus tag: ABC1144
Name: ytcQ Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component
Locus tag: ABC1145
Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
Locus tag: ABC1146
Name: ytcP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
Locus tag: ABC1147
Name: null Funciton: Putative hydrolase
Locus tag: ABC1148
Name: xylB Funciton: Beta-xylosidase (EC 3.2.1.37)
Locus tag: ABC1149
Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: ABC1150
Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation
Locus tag: ABC1151
Name: null Funciton: Hypothetical protein
Locus tag: ABC1152
Name: yteT Funciton: Putative dehydrogenase of rhamnogalaturonan degradation
Locus tag: ABC1153
Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7)
Locus tag: ABC1154
Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58) |
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ytcQ
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Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component
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yteP
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Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
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ytcP
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Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
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Putative hydrolase
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xylB
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Beta-xylosidase (EC 3.2.1.37)
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rhiN2
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Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
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yteS
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putative lipoprotein required for rhamnogalaturonan degradation
|
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Hypothetical protein
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yteT
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Putative dehydrogenase of rhamnogalaturonan degradation
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uxaA
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Altronate hydrolase (EC 4.2.1.7)
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uxaB
|
Altronate oxidoreductase (EC 1.1.1.58)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |