Regulon of AllR in Salmonella typhimurium LT2

Properties
Regulator type:	Transcription factor
TF locus tag:	STM0516
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Allantoin utilization
Effector:	Allantoin
Regulog:	AllR - Enterobacteriales
Statistics of regulated genes:
- Genes	12
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - IclR
By effector - Allantoin
By pathway - Allantoin utilization

Regulated operons
	Locus Tag	Name	Function
Position: -121 Score: 6.6 Sequence: TTGGAAAAATATTCCAA Locus tag: STM0515 Name: allA Funciton: ureidoglycolate hydrolase Locus tag: STM0516 Name: allR Funciton: transcriptional repressor of allantoin utilization
	STM0515	allA	ureidoglycolate hydrolase
	STM0516	allR	transcriptional repressor of allantoin utilization
Position: -122 Score: 6.6 Sequence: TTGGAATATTTTTCCAA Locus tag: STM0514 Name: allS Funciton: DNA-binding transcriptional activator of the allD operon
	STM0514	allS	DNA-binding transcriptional activator of the allD operon
Position: -37 Score: 6.4 Sequence: TTGGAAACTTTTTCCAA Locus tag: STM0517 Name: gcl Funciton: glyoxylate carboligase Locus tag: STM0518 Name: hyi Funciton: hydroxypyruvate isomerase Locus tag: STM0519 Name: glxR Funciton: tartronic semialdehyde reductase Locus tag: STM0520 Name: STM0520 Funciton: putative permease Locus tag: STM0521 Name: ybbV Funciton: putative cytoplasmic protein Locus tag: STM0522 Name: ybbW Funciton: putative allantoin transporter, NCS1 family Locus tag: STM0523 Name: allB Funciton: allantoinase Locus tag: STM0524 Name: ybbY Funciton: putative allantoin transporter Locus tag: STM0525 Name: glxK Funciton: glycerate kinase II
	STM0517	gcl	glyoxylate carboligase
	STM0518	hyi	hydroxypyruvate isomerase
	STM0519	glxR	tartronic semialdehyde reductase
	STM0520	STM0520	putative permease
	STM0521	ybbV	putative cytoplasmic protein
	STM0522	ybbW	putative allantoin transporter, NCS1 family
	STM0523	allB	allantoinase
	STM0524	ybbY	putative allantoin transporter
	STM0525	glxK	glycerate kinase II

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD