Regulon of Crp in Cyanothece sp. PCC 8801
| Regulator type: | Transcription factor |
| TF locus tag: | PCC8801_0890 |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | |
| Effector: | Cyclic 3',5'-AMP |
| Regulog: | Crp - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 21 |
| - Operons | 16 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - CRP
- By effector - Cyclic 3',5'-AMP
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -74
Score: 4.8 Sequence: AGTGATCTGGGTCACA
Locus tag: PCC8801_2372
Name: murF Funciton: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) |
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murF
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UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
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Position: -155
Score: 3.7 Sequence: TTTGATCAATTTGACA
Locus tag: PCC8801_3186
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
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serS
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Seryl-tRNA synthetase (EC 6.1.1.11)
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Position: 21
Score: 4.3 Sequence: AGTGACAATGTTCATA
Locus tag: PCC8801_1790
Name: nifX Funciton: Nitrogen fixation protein
Locus tag: PCC8801_1791
Name: nifK1 Funciton: Nitrogen fixation protein
Locus tag: PCC8801_1792
Name: nifK2 Funciton: Nitrogen fixation protein
Locus tag: PCC8801_1793
Name: nifW Funciton: Nitrogenase-stabilizing/protective protein
Locus tag: PCC8801_1794
Name: hesA Funciton: Nitrogen fixation related protein
Locus tag: PCC8801_1795
Name: hesB Funciton: Nitrogen fixation related protein |
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nifX
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Nitrogen fixation protein
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nifK1
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Nitrogen fixation protein
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nifK2
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Nitrogen fixation protein
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nifW
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Nitrogenase-stabilizing/protective protein
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hesA
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Nitrogen fixation related protein
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hesB
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Nitrogen fixation related protein
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Position: -41
Score: 3.8 Sequence: GTTGATTTAAGTCCTA
Locus tag: PCC8801_0414
Name: sufR Funciton: Iron-sulfur cluster biogenesis regulator, DeoR family |
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sufR
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Iron-sulfur cluster biogenesis regulator, DeoR family
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Position: -153
Score: 3.8 Sequence: TTTGATCTCGATCATT
Locus tag: PCC8801_0091
Name: SYNPCC7002_A0687 Funciton: Conserved hypothetical protein |
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SYNPCC7002_A0687
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Conserved hypothetical protein
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Position: -80
Score: 3.9 Sequence: TTTGAAAATTATCACC
Locus tag: PCC8801_1783
Name: nifS Funciton: Cysteine desulfurase (EC 2.8.1.7) |
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nifS
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Cysteine desulfurase (EC 2.8.1.7)
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Position: -250
Score: 4.3 Sequence: TTTGATTTAATTCAAC
Locus tag: PCC8801_3705
Name: chlA-II Funciton: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81) |
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chlA-II
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Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
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Position: -31
Score: 4 Sequence: ATTGAGCTAAAGCATA
Locus tag: PCC8801_2557
Name: gap2 Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59) |
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gap2
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Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
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Position: -203
Score: 4.3 Sequence: GGTGACAGAAATCAAA
Locus tag: PCC8801_3887
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -199
Score: 4.2 Sequence: ACTGATTTAATTCACT
Locus tag: PCC8801_1006
Name: cupS Funciton: Carbon dioxide uptake protein |
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cupS
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Carbon dioxide uptake protein
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Position: -35
Score: 4.6 Sequence: TGTGAGCTAAATCACT
Locus tag: PCC8801_0019
Name: slr1503 Funciton: Predicted aldo/keto reductase |
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slr1503
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Predicted aldo/keto reductase
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Position: -115
Score: 4.2 Sequence: ATTGATATTAATCAAT
Locus tag: PCC8801_3693
Name: SYNPCC7002_A2113 Funciton: Transglutaminase-like protein |
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SYNPCC7002_A2113
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Transglutaminase-like protein
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Position: -177
Score: 4 Sequence: TGTGATACTCATCATA
Locus tag: PCC8801_2042
Name: ppa Funciton: inorganic pyrophosphatase |
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ppa
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inorganic pyrophosphatase
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Position: -239
Score: 3.8 Sequence: GGTGAAATTAGGCAAA
Locus tag: PCC8801_1079
Name: rlpA Funciton: Predicted lipoprotein A |
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rlpA
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Predicted lipoprotein A
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Position: 5
Score: 3.9 Sequence: GATGTTTAAAGTCACC
Locus tag: PCC8801_2788
Name: apcC Funciton: Phycobilisome linker polypeptide, allophycocyanin-associated |
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apcC
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Phycobilisome linker polypeptide, allophycocyanin-associated
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Position: -271
Score: 3.7 Sequence: AGTGACCTAAATTCCG
Locus tag: PCC8801_4329
Name: sigF Funciton: RNA polymerase sigma-37 |
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sigF
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RNA polymerase sigma-37
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |