Regulon of Crp in Cyanothece sp. PCC 8801

Properties
Regulator type:	Transcription factor
TF locus tag:	PCC8801_0890
Regulator family:	CRP
Regulation mode:	repressor (activator)
Biological process:
Effector:	Cyclic 3',5'-AMP
Regulog:	Crp - Cyanobacteria
Statistics of regulated genes:
- Genes	21
- Operons	16
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 106 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - CRP
By effector - Cyclic 3',5'-AMP

Regulated operons
	Locus Tag	Name	Function
Position: -74 Score: 4.8 Sequence: AGTGATCTGGGTCACA Locus tag: PCC8801_2372 Name: murF Funciton: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
	PCC8801_2372	murF	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
Position: -155 Score: 3.7 Sequence: TTTGATCAATTTGACA Locus tag: PCC8801_3186 Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
	PCC8801_3186	serS	Seryl-tRNA synthetase (EC 6.1.1.11)
Position: 21 Score: 4.3 Sequence: AGTGACAATGTTCATA Locus tag: PCC8801_1790 Name: nifX Funciton: Nitrogen fixation protein Locus tag: PCC8801_1791 Name: nifK1 Funciton: Nitrogen fixation protein Locus tag: PCC8801_1792 Name: nifK2 Funciton: Nitrogen fixation protein Locus tag: PCC8801_1793 Name: nifW Funciton: Nitrogenase-stabilizing/protective protein Locus tag: PCC8801_1794 Name: hesA Funciton: Nitrogen fixation related protein Locus tag: PCC8801_1795 Name: hesB Funciton: Nitrogen fixation related protein
	PCC8801_1790	nifX	Nitrogen fixation protein
	PCC8801_1791	nifK1	Nitrogen fixation protein
	PCC8801_1792	nifK2	Nitrogen fixation protein
	PCC8801_1793	nifW	Nitrogenase-stabilizing/protective protein
	PCC8801_1794	hesA	Nitrogen fixation related protein
	PCC8801_1795	hesB	Nitrogen fixation related protein
Position: -41 Score: 3.8 Sequence: GTTGATTTAAGTCCTA Locus tag: PCC8801_0414 Name: sufR Funciton: Iron-sulfur cluster biogenesis regulator, DeoR family
	PCC8801_0414	sufR	Iron-sulfur cluster biogenesis regulator, DeoR family
Position: -153 Score: 3.8 Sequence: TTTGATCTCGATCATT Locus tag: PCC8801_0091 Name: SYNPCC7002_A0687 Funciton: Conserved hypothetical protein
	PCC8801_0091	SYNPCC7002_A0687	Conserved hypothetical protein
Position: -80 Score: 3.9 Sequence: TTTGAAAATTATCACC Locus tag: PCC8801_1783 Name: nifS Funciton: Cysteine desulfurase (EC 2.8.1.7)
	PCC8801_1783	nifS	Cysteine desulfurase (EC 2.8.1.7)
Position: -250 Score: 4.3 Sequence: TTTGATTTAATTCAAC Locus tag: PCC8801_3705 Name: chlA-II Funciton: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
	PCC8801_3705	chlA-II	Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
Position: -31 Score: 4 Sequence: ATTGAGCTAAAGCATA Locus tag: PCC8801_2557 Name: gap2 Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
	PCC8801_2557	gap2	Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
Position: -203 Score: 4.3 Sequence: GGTGACAGAAATCAAA Locus tag: PCC8801_3887 Name: ackA Funciton: Acetate kinase (EC 2.7.2.1)
	PCC8801_3887	ackA	Acetate kinase (EC 2.7.2.1)
Position: -199 Score: 4.2 Sequence: ACTGATTTAATTCACT Locus tag: PCC8801_1006 Name: cupS Funciton: Carbon dioxide uptake protein
	PCC8801_1006	cupS	Carbon dioxide uptake protein
Position: -35 Score: 4.6 Sequence: TGTGAGCTAAATCACT Locus tag: PCC8801_0019 Name: slr1503 Funciton: Predicted aldo/keto reductase
	PCC8801_0019	slr1503	Predicted aldo/keto reductase
Position: -115 Score: 4.2 Sequence: ATTGATATTAATCAAT Locus tag: PCC8801_3693 Name: SYNPCC7002_A2113 Funciton: Transglutaminase-like protein
	PCC8801_3693	SYNPCC7002_A2113	Transglutaminase-like protein
Position: -177 Score: 4 Sequence: TGTGATACTCATCATA Locus tag: PCC8801_2042 Name: ppa Funciton: inorganic pyrophosphatase
	PCC8801_2042	ppa	inorganic pyrophosphatase
Position: -239 Score: 3.8 Sequence: GGTGAAATTAGGCAAA Locus tag: PCC8801_1079 Name: rlpA Funciton: Predicted lipoprotein A
	PCC8801_1079	rlpA	Predicted lipoprotein A
Position: 5 Score: 3.9 Sequence: GATGTTTAAAGTCACC Locus tag: PCC8801_2788 Name: apcC Funciton: Phycobilisome linker polypeptide, allophycocyanin-associated
	PCC8801_2788	apcC	Phycobilisome linker polypeptide, allophycocyanin-associated
Position: -271 Score: 3.7 Sequence: AGTGACCTAAATTCCG Locus tag: PCC8801_4329 Name: sigF Funciton: RNA polymerase sigma-37
	PCC8801_4329	sigF	RNA polymerase sigma-37

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Crp in Cyanothece sp. PCC 8801

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --