Regulon of FadR in Geobacillus kaustophilus HTA426
| Regulator type: | Transcription factor |
| TF locus tag: | GK2689 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - TetR
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -38
Score: 6.3 Sequence: ATGAATGGTCATTCATTCAT
Locus tag: GK0668
Name: lcfB Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfB
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -40
Score: 6.5 Sequence: ATGAATGACCATTCATTCAA
Locus tag: GK3008
Name: fadN Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: GK3007
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: GK3006
Name: fadE Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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fadN
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Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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fadE
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -106
Score: 6.3 Sequence: TTGACTGAATGCTCATTCAT
Locus tag: GK3398
Name: fadF Funciton: Fe-S oxidoreductase
Locus tag: GK3397
Name: mmgA Funciton: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: GK3396
Name: GK3396 Funciton: Hypothetical protein
Locus tag: GK3395
Name: mmgB Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
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fadF
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Fe-S oxidoreductase
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mmgA
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Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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GK3396
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Hypothetical protein
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mmgB
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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Position: -60
Score: 6.1 Sequence: ATGAATGATGGTTCATTCAT
Locus tag: GK2689
Name: fadR Funciton: Transcriptional regulator of fatty acids degradation, TetR family
Locus tag: GK2688
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: GK2687
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: GK2686
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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fadR
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Transcriptional regulator of fatty acids degradation, TetR family
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -76
Score: 5.5 Sequence: AAAAATGAATGATCATTCAT
Locus tag: GK1401
Name: Aflv_1606 Funciton: hypothetical Zn-dependent hydrolase |
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Aflv_1606
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hypothetical Zn-dependent hydrolase
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Position: -34
Score: 6.5 Sequence: ATGAATGAGTAATCAGTCAT
Locus tag: GK1044
Name: null Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family |
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Oxidoreductase, short-chain dehydrogenase/reductase family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |