Regulon of FadR in Bacillus pumilus SAFR-032
| Regulator type: | Transcription factor |
| TF locus tag: | BPUM_2512 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - TetR
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -44
Score: 6.5 Sequence: ATGAATGGTTATTCATTCAT
Locus tag: BPUM_0969
Name: lcfB Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfB
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -39
Score: 6.5 Sequence: ATGAATGACTGTTCATTCAA
Locus tag: BPUM_2942
Name: fadN Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: BPUM_2941
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: BPUM_2940
Name: fadE Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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fadN
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Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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fadE
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -88
Score: 6.6 Sequence: TTGACTGAATACTCATTCAT
Locus tag: BPUM_3374
Name: fadF Funciton: Fe-S oxidoreductase
Locus tag: BPUM_3373
Name: mmgA Funciton: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: BPUM_3372
Name: mmgB Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: BPUM_3371
Name: mmgC Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: BPUM_3370
Name: acdA Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.-) |
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fadF
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Fe-S oxidoreductase
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mmgA
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Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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mmgB
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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mmgC
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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acdA
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Acyl-CoA dehydrogenase (EC 1.3.99.-)
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Position: -41
Score: 6.8 Sequence: ATGAATGAATACTCATTCAA
Locus tag: BPUM_2512
Name: fadR Funciton: Transcriptional regulator of fatty acids degradation, TetR family
Locus tag: BPUM_2511
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: BPUM_2510
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: BPUM_2509
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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fadR
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Transcriptional regulator of fatty acids degradation, TetR family
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -40
Score: 6.7 Sequence: ATGAATGAATAGTCATTCAA
Locus tag: BPUM_1303
Name: ykuF Funciton: short chain dehydrogenase |
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ykuF
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short chain dehydrogenase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |