Regulon of FadR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type:	Transcription factor
TF locus tag:	RBAM_025610
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Bacillales
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 48 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - TetR
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 6.7 Sequence: ATGAATGACTATTCATTCAA Locus tag: RBAM_029920 Name: fadN Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: RBAM_029910 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: RBAM_029900 Name: fadE Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	RBAM_029920	fadN	Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	RBAM_029910	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	RBAM_029900	fadE	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -82 Score: 6.3 Sequence: TTGACTGAACACTCATTCAT Locus tag: RBAM_034330 Name: fadF Funciton: Fe-S oxidoreductase
	RBAM_034330	fadF	Fe-S oxidoreductase
Position: -38 Score: 6.9 Sequence: ATGAATGAATAGTCATTCAT Locus tag: RBAM_025610 Name: fadR Funciton: Transcriptional regulator of fatty acids degradation, TetR family Locus tag: RBAM_025600 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: RBAM_025590 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: RBAM_025580 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	RBAM_025610	fadR	Transcriptional regulator of fatty acids degradation, TetR family
	RBAM_025600	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	RBAM_025590	etfB	Electron transfer flavoprotein, beta subunit
	RBAM_025580	etfA	Electron transfer flavoprotein, alpha subunit
Position: -44 Score: 6.9 Sequence: ATGAATGACTATTCATTCAT Locus tag: RBAM_010470 Name: lcfB Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	RBAM_010470	lcfB	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -40 Score: 6.8 Sequence: ATGAATGATTATTCATTCAA Locus tag: RBAM_013850 Name: ykuF Funciton: 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34)
	RBAM_013850	ykuF	2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD