Regulon of FadR in Bacillus amyloliquefaciens FZB42
| Regulator type: | Transcription factor |
| TF locus tag: | RBAM_025610 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - TetR
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -39
Score: 6.7 Sequence: ATGAATGACTATTCATTCAA
Locus tag: RBAM_029920
Name: fadN Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: RBAM_029910
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: RBAM_029900
Name: fadE Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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fadN
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Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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fadE
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -82
Score: 6.3 Sequence: TTGACTGAACACTCATTCAT
Locus tag: RBAM_034330
Name: fadF Funciton: Fe-S oxidoreductase |
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fadF
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Fe-S oxidoreductase
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Position: -38
Score: 6.9 Sequence: ATGAATGAATAGTCATTCAT
Locus tag: RBAM_025610
Name: fadR Funciton: Transcriptional regulator of fatty acids degradation, TetR family
Locus tag: RBAM_025600
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: RBAM_025590
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: RBAM_025580
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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fadR
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Transcriptional regulator of fatty acids degradation, TetR family
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -44
Score: 6.9 Sequence: ATGAATGACTATTCATTCAT
Locus tag: RBAM_010470
Name: lcfB Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfB
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -40
Score: 6.8 Sequence: ATGAATGATTATTCATTCAA
Locus tag: RBAM_013850
Name: ykuF Funciton: 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34) |
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ykuF
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2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |