Regulon of NagC in Erwinia carotovora subsp. atroseptica SCRI1043
| Regulator type: | Transcription factor |
| TF locus tag: | ECA1324 |
| Regulator family: | ROK |
| Regulation mode: | repressor (activator) |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Regulog: | NagC - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - NagC
- By TF family - ROK
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -172
Score: 5.7 Sequence: TTTAATTTGTGTAGCGAATTATT
Locus tag: ECA1327
Name: nagE Funciton: PTS system, N-acetylglucosamine-specific IIABC component |
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nagE
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PTS system, N-acetylglucosamine-specific IIABC component
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Position: -211
Score: 5.7 Sequence: AATAATTCGCTACACAAATTAAA
Position: -118
Score: 4.6 Sequence: CTTATTTCAAGATTAAAAAAAAC
Locus tag: ECA1326
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: ECA1325
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: ECA1324
Name: nagC Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagC
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N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
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Position: -203
Score: 5.4 Sequence: ATTTTTTCGATAAGTAAAATAAA
Locus tag: ECA2385
Name: manX Funciton: PTS system, mannose-specific IIAB component
Locus tag: ECA2386
Name: manY Funciton: PTS system, mannose-specific IIc component
Locus tag: ECA2387
Name: manZ Funciton: PTS system, mannose-specific IID component |
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manX
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PTS system, mannose-specific IIAB component
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manY
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PTS system, mannose-specific IIc component
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manZ
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PTS system, mannose-specific IID component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |