Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagC in Citrobacter koseri ATCC BAA-895

Properties
Regulator type: Transcription factor
TF locus tag: CKO_02488
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Regulog: NagC - Enterobacteriales
Statistics of regulated genes:
- Genes 16
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 68 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -151
Score: 6
Sequence: TTTAATTTGCGATACGAATTAAT
Locus tag: CKO_02485
Name: nagE
Funciton: PTS system, N-acetylglucosamine-specific IIABC component
CKO_02485
nagE
PTS system, N-acetylglucosamine-specific IIABC component
Position: -215
Score: 6
Sequence: ATTAATTCGTATCGCAAATTAAA
Position: -121
Score: 4.6
Sequence: CTTATTTTATCATTCAAAAAATC
Locus tag: CKO_02486
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: CKO_02487
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: CKO_02488
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: CKO_02489
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
CKO_02486
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
CKO_02487
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
CKO_02488
nagC
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
CKO_02489
nagD
Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
Position: -139
Score: 5.4
Sequence: TTTTTTTCGCTATCTAAAATAAT
Locus tag: CKO_01161
Name: manX
Funciton: PTS system, mannose-specific IIAB component
Locus tag: CKO_01160
Name: manY
Funciton: PTS system, mannose-specific IIc component
Locus tag: CKO_01159
Name: manZ
Funciton: PTS system, mannose-specific IID component
CKO_01161
manX
PTS system, mannose-specific IIAB component
CKO_01160
manY
PTS system, mannose-specific IIc component
CKO_01159
manZ
PTS system, mannose-specific IID component
Position: -217
Score: 5.1
Sequence: CTTATTTATTGTCGCGAAATATT
Locus tag: CKO_01763
Name: chbB
Funciton: PTS system, chitobiose-specific IIB component (EC 2.7.1.69)
Locus tag: CKO_01762
Name: chbC
Funciton: PTS system, chitobiose-specific IIC component (EC 2.7.1.69)
Locus tag: CKO_01761
Name: chbA
Funciton: N,N'-diacetylchitobiose-specific PTS system, EIIA component
Locus tag: CKO_01760
Name: chbR
Funciton: Chitobiose-specific regulator ChbR, AraC family
Locus tag: CKO_01759
Name: chbF
Funciton: Chitobiose-specific 6-phospho-beta-glucosidase ChbF (EC 3.2.1.86)
Locus tag: CKO_01758
Name: chbG
Funciton: Cellobiose phosphotransferase system YdjC-like protein
CKO_01763
chbB
PTS system, chitobiose-specific IIB component (EC 2.7.1.69)
CKO_01762
chbC
PTS system, chitobiose-specific IIC component (EC 2.7.1.69)
CKO_01761
chbA
N,N'-diacetylchitobiose-specific PTS system, EIIA component
CKO_01760
chbR
Chitobiose-specific regulator ChbR, AraC family
CKO_01759
chbF
Chitobiose-specific 6-phospho-beta-glucosidase ChbF (EC 3.2.1.86)
CKO_01758
chbG
Cellobiose phosphotransferase system YdjC-like protein
Position: -233
Score: 4.8
Sequence: CTTTATTCATGGGTCAAAAAAAT
Locus tag: CKO_00067
Name: glmU
Funciton: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
Locus tag: CKO_00066
Name: glmS
Funciton: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
CKO_00067
glmU
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
CKO_00066
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
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