Regulon of LexA in Photorhabdus luminescens subsp. laumondii TTO1
| Regulator type: | Transcription factor |
| TF locus tag: | plu4374 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 15 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -55
Score: 5 Sequence: TTCTGTATAAAAACACAGCA
Locus tag: plu4636
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -100
Score: 5.8 Sequence: TGCTGTATGATTATACAGTA
Locus tag: plu1249
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -40
Score: 6 Sequence: TACTGTATATTAATACAGTT
Locus tag: plu1776
Name: sulA Funciton: Cell division inhibitor sulA |
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sulA
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Cell division inhibitor sulA
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Position: -42
Score: 4.8 Sequence: TTATGTATGTTTATACAGTT
Locus tag: plu1239
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -26
Score: 5.2 Sequence: GACTGTATAAACAAACAGGG
Locus tag: plu4374
Name: lexA Funciton: LexA repressor |
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lexA
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LexA repressor
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Position: -81
Score: 5.5 Sequence: TCCTGTTTATGCATACAGTT
Locus tag: plu1601
Name: ftsK Funciton: DNA translocase FtsK |
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ftsK
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DNA translocase FtsK
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Position: -37
Score: 5 Sequence: GACTGTATGGATAGACAGTT
Locus tag: plu2679
Name: ydjM Funciton: membrane-bound metal-dependent hydrolase |
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ydjM
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membrane-bound metal-dependent hydrolase
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Position: -68
Score: 5.6 Sequence: TACTGTATAAAAAACCAGTT
Position: -46
Score: 4.8 Sequence: TACTGTATGAAGATACAGAG
Position: -28
Score: 4.5 Sequence: AGGTGTTTTTATACACAGGA
Locus tag: plu3374
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -56
Score: 5.3 Sequence: AGCTGGTTTTATATCCAGTA
Locus tag: plu1491
Name: uvrB Funciton: Excinuclease ABC subunit B |
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uvrB
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Excinuclease ABC subunit B
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Position: -85
Score: 4.6 Sequence: GGCTGGATATGCATCCAGCT
Locus tag: plu2111
Name: ruvA Funciton: Holliday junction helicase subunit A
Locus tag: plu2112
Name: ruvB Funciton: Holliday junction DNA helicase B |
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ruvA
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Holliday junction helicase subunit A
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ruvB
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Holliday junction DNA helicase B
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Position: -65
Score: 5.1 Sequence: ACTTGTATATCTATACAGTT
Locus tag: plu0292
Name: tag Funciton: DNA-3-methyladenine glycosylase I |
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tag
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DNA-3-methyladenine glycosylase I
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Position: -169
Score: 5.3 Sequence: GACTGATTAGATATACAGTA
Locus tag: plu4349
Name: ssb Funciton: single-strand binding protein |
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ssb
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single-strand binding protein
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Position: -65
Score: 5.7 Sequence: TACTGTTTATATGAACAGTA
Locus tag: plu1815
Name: dinI Funciton: DNA damage-inducible protein |
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dinI
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DNA damage-inducible protein
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Position: -209
Score: 5.3 Sequence: TACTGTATATCTAATCAGTC
Locus tag: plu4350
Name: uvrA Funciton: excinuclease ABC subunit A |
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uvrA
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excinuclease ABC subunit A
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Position: -65
Score: 5 Sequence: TTCTGGACATCTATACAGTA
Locus tag: plu4414
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |