Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Photorhabdus luminescens subsp. laumondii TTO1

Properties
Regulator type: Transcription factor
TF locus tag: plu4374
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Enterobacteriales
Statistics of regulated genes:
- Genes 16
- Operons 15
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 265 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -55
Score: 5
Sequence: TTCTGTATAAAAACACAGCA
Locus tag: plu4636
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -100
Score: 5.8
Sequence: TGCTGTATGATTATACAGTA
Locus tag: plu1249
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -40
Score: 6
Sequence: TACTGTATATTAATACAGTT
Locus tag: plu1776
Name: sulA
Funciton: Cell division inhibitor sulA
sulA
Cell division inhibitor sulA

Position: -42
Score: 4.8
Sequence: TTATGTATGTTTATACAGTT
Locus tag: plu1239
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinB
DNA polymerase IV (EC 2.7.7.7)

Position: -26
Score: 5.2
Sequence: GACTGTATAAACAAACAGGG
Locus tag: plu4374
Name: lexA
Funciton: LexA repressor
lexA
LexA repressor

Position: -81
Score: 5.5
Sequence: TCCTGTTTATGCATACAGTT
Locus tag: plu1601
Name: ftsK
Funciton: DNA translocase FtsK
ftsK
DNA translocase FtsK

Position: -37
Score: 5
Sequence: GACTGTATGGATAGACAGTT
Locus tag: plu2679
Name: ydjM
Funciton: membrane-bound metal-dependent hydrolase
ydjM
membrane-bound metal-dependent hydrolase

Position: -68
Score: 5.6
Sequence: TACTGTATAAAAAACCAGTT
Position: -46
Score: 4.8
Sequence: TACTGTATGAAGATACAGAG
Position: -28
Score: 4.5
Sequence: AGGTGTTTTTATACACAGGA
Locus tag: plu3374
Name: recN
Funciton: DNA repair protein RecN
recN
DNA repair protein RecN

Position: -56
Score: 5.3
Sequence: AGCTGGTTTTATATCCAGTA
Locus tag: plu1491
Name: uvrB
Funciton: Excinuclease ABC subunit B
uvrB
Excinuclease ABC subunit B

Position: -85
Score: 4.6
Sequence: GGCTGGATATGCATCCAGCT
Locus tag: plu2111
Name: ruvA
Funciton: Holliday junction helicase subunit A
Locus tag: plu2112
Name: ruvB
Funciton: Holliday junction DNA helicase B
ruvA
Holliday junction helicase subunit A
ruvB
Holliday junction DNA helicase B

Position: -65
Score: 5.1
Sequence: ACTTGTATATCTATACAGTT
Locus tag: plu0292
Name: tag
Funciton: DNA-3-methyladenine glycosylase I
tag
DNA-3-methyladenine glycosylase I

Position: -169
Score: 5.3
Sequence: GACTGATTAGATATACAGTA
Locus tag: plu4349
Name: ssb
Funciton: single-strand binding protein
ssb
single-strand binding protein

Position: -65
Score: 5.7
Sequence: TACTGTTTATATGAACAGTA
Locus tag: plu1815
Name: dinI
Funciton: DNA damage-inducible protein
dinI
DNA damage-inducible protein

Position: -209
Score: 5.3
Sequence: TACTGTATATCTAATCAGTC
Locus tag: plu4350
Name: uvrA
Funciton: excinuclease ABC subunit A
uvrA
excinuclease ABC subunit A

Position: -65
Score: 5
Sequence: TTCTGGACATCTATACAGTA
Locus tag: plu4414
Name: rmuC
Funciton: DNA recombination protein RmuC
rmuC
DNA recombination protein RmuC
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD