Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b4043
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Enterobacteriales
Statistics of regulated genes:
- Genes 30
- Operons 26
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 265 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -76
Score: 4.9
Sequence: ATCTGTATATATACCCAGCT
Locus tag: b3813
Name: uvrD
Funciton: ATP-dependent DNA helicase II
b3813
uvrD
ATP-dependent DNA helicase II
Position: -79
Score: 5.7
Sequence: TACTGTATGAGCATACAGTA
Locus tag: b2699
Name: recA
Funciton: Recombinase A
Locus tag: b2698
Name: recX
Funciton: regulatory protein RecX
b2699
recA
Recombinase A
b2698
recX
regulatory protein RecX
Position: -42
Score: 5.6
Sequence: TACTGTACATCCATACAGTA
Locus tag: b0958
Name: sulA
Funciton: Cell division inhibitor sulA
b0958
sulA
Cell division inhibitor sulA
Position: -34
Score: 4.8
Sequence: CACTGTATACTTTACCAGTG
Locus tag: b0231
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
b0231
dinB
DNA polymerase IV (EC 2.7.7.7)
Position: -47
Score: 5.1
Sequence: TGCTGTATATACTCACAGCA
Position: -26
Score: 5.2
Sequence: AACTGTATATACACCCAGGG
Locus tag: b4043
Name: lexA
Funciton: LexA repressor
Locus tag: b4044
Name: dinF
Funciton: DNA-damage-inducible SOS response protein
b4043
lexA
LexA repressor
b4044
dinF
DNA-damage-inducible SOS response protein
Position: -96
Score: 5
Sequence: TCCTGTTAATCCATACAGCA
Locus tag: b0890
Name: ftsK
Funciton: DNA translocase FtsK
b0890
ftsK
DNA translocase FtsK
Position: -52
Score: 4.4
Sequence: CACTGTATAAAAATCCTATA
Position: -34
Score: 4.7
Sequence: TACTGTACGTATCGACAGTT
Locus tag: b1728
Name: ydjM
Funciton: membrane-bound metal-dependent hydrolase
b1728
ydjM
membrane-bound metal-dependent hydrolase
Position: -68
Score: 5.7
Sequence: TACTGTATATAAAACCAGTT
Position: -46
Score: 4.9
Sequence: TACTGTACACAATAACAGTA
Position: -28
Score: 4.7
Sequence: TAATGGTTTTTCATACAGGA
Locus tag: b2616
Name: recN
Funciton: DNA repair protein RecN
b2616
recN
DNA repair protein RecN
Position: -39
Score: 5.6
Sequence: ACCTGTATAAATAACCAGTA
Locus tag: b1061
Name: dinI
Funciton: DNA damage-inducible protein
b1061
dinI
DNA damage-inducible protein
Position: -94
Score: 5.6
Sequence: AACTGTTTTTTTATCCAGTA
Locus tag: b0779
Name: uvrB
Funciton: Excinuclease ABC subunit B
b0779
uvrB
Excinuclease ABC subunit B
Position: -69
Score: 5
Sequence: CGCTGGATATCTATCCAGCA
Locus tag: b1861
Name: ruvA
Funciton: Holliday junction helicase subunit A
Locus tag: b1860
Name: ruvB
Funciton: Holliday junction DNA helicase B
b1861
ruvA
Holliday junction helicase subunit A
b1860
ruvB
Holliday junction DNA helicase B
Position: -37
Score: 5.3
Sequence: TACTGTATAAAATCACAGTT
Locus tag: b1848
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
b1848
yebG
SOS regulon DNA damage-inducible protein
Position: -170
Score: 5.5
Sequence: ACCTGAATGAATATACAGTA
Locus tag: b4059
Name: ssb
Funciton: single-strand binding protein
b4059
ssb
single-strand binding protein
Position: -34
Score: 4.9
Sequence: TATTGGCTGTTTATACAGTA
Locus tag: b0799
Name: dinG
Funciton: ATP-dependent helicase DinG/Rad3
b0799
dinG
ATP-dependent helicase DinG/Rad3
Position: -33
Score: 5.1
Sequence: CACTGGATAGATAACCAGCA
Locus tag: b1741
Name: cho
Funciton: endonuclease of nucleotide excision repair
b1741
cho
endonuclease of nucleotide excision repair
Position: -69
Score: 4.9
Sequence: TGCTGTTTTTATAAACAATG
Locus tag: b3068
Name: ygjF
Funciton: DNA glycosylase, G/U mismatch specific
b3068
ygjF
DNA glycosylase, G/U mismatch specific
Position: -254
Score: 6.1
Sequence: TACTGTTTATTTATACAGTA
Locus tag: b4618
Name: tisB
Funciton: lexA-regulated toxic peptide
b4618
tisB
lexA-regulated toxic peptide
Position: -63
Score: 5.9
Sequence: AACTGTATATAAATACAGTT
Locus tag: b3645
Name: dinD
Funciton: DNA-damage-inducible protein
b3645
dinD
DNA-damage-inducible protein
Position: -188
Score: 4.3
Sequence: TGCTGGTTTTATAACCTGCA
Position: -166
Score: 5.7
Sequence: TACTGTATGATTATCCAGTT
Locus tag: b4613
Name: dinQ
Funciton: Damage inducible, function unknown
b4613
dinQ
Damage inducible, function unknown
Position: -95
Score: 5
Sequence: TACTGATGATATATACAGGT
Locus tag: b4347
Name: yjiW
Funciton: LexA regulated, putative SOS response
b4347
yjiW
LexA regulated, putative SOS response
Position: -73
Score: 4.3
Sequence: GACTGTATAAAACCACAGCC
Locus tag: b0060
Name: polB
Funciton: DNA polymerase II (EC 2.7.7.7)
b0060
polB
DNA polymerase II (EC 2.7.7.7)
Position: -103
Score: 5.5
Sequence: TACTGTATATTCATTCAGGT
Locus tag: b4058
Name: uvrA
Funciton: excinuclease ABC subunit A
b4058
uvrA
excinuclease ABC subunit A
Position: -136
Score: 4.5
Sequence: AACTGATTAAAAACCCAGCG
Locus tag: b0685
Name: ybfE
Funciton: LexA regulated protein
b0685
ybfE
LexA regulated protein
Position: -39
Score: 6.1
Sequence: TACTGTATATAAAAACAGTA
Locus tag: b1183
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: b1184
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
b1183
umuD
DNA polymerase V, subunit UmuD
b1184
umuC
DNA polymerase V, subunit UmuC
Position: -34
Score: 6.1
Sequence: TACTGTATATAAAAACAGTA
Locus tag: b2009
Name: sbmC
Funciton: DNA gyrase inhibitor
b2009
sbmC
DNA gyrase inhibitor
Position: -73
Score: 4.3
Sequence: AAATGTTTTTACATCCACTA
Locus tag: b0221
Name: yafH
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
b0221
yafH
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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