Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM4237
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Enterobacteriales
Statistics of regulated genes:
- Genes 32
- Operons 27
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 265 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -125
Score: 4.8
Sequence: TTCTGTATAAATTCCCAGTT
Locus tag: STM3951
Name: uvrD
Funciton: ATP-dependent DNA helicase II
STM3951
uvrD
ATP-dependent DNA helicase II
Position: -84
Score: 5.7
Sequence: TACTGTATGAGCATACAGTA
Locus tag: STM2829
Name: recA
Funciton: Recombinase A
Locus tag: STM2828
Name: recX
Funciton: regulatory protein RecX
STM2829
recA
Recombinase A
STM2828
recX
regulatory protein RecX
Position: -41
Score: 6.2
Sequence: TACTGTATGAATATACAGTA
Locus tag: STM1071
Name: sulA
Funciton: Cell division inhibitor sulA
STM1071
sulA
Cell division inhibitor sulA
Position: -35
Score: 5.4
Sequence: TACTGTACACTTAAACAGTA
Locus tag: STM0313
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
STM0313
dinB
DNA polymerase IV (EC 2.7.7.7)
Position: -47
Score: 5.2
Sequence: AACTGTATATACTCACAGCA
Position: -26
Score: 4.4
Sequence: GATTGTATATACACCCAGGG
Locus tag: STM4237
Name: lexA
Funciton: LexA repressor
Locus tag: STM4238
Name: dinF
Funciton: DNA-damage-inducible SOS response protein
STM4237
lexA
LexA repressor
STM4238
dinF
DNA-damage-inducible SOS response protein
Position: -96
Score: 5
Sequence: TCCTGTTAATCCATACAGCA
Locus tag: STM0960
Name: ftsK
Funciton: DNA translocase FtsK
STM0960
ftsK
DNA translocase FtsK
Position: -52
Score: 4.4
Sequence: TACTGTATAAAAACCCTATA
Position: -34
Score: 5.2
Sequence: TACTGTATGAATTGACAGTT
Locus tag: STM1321
Name: ydjM
Funciton: membrane-bound metal-dependent hydrolase
STM1321
ydjM
membrane-bound metal-dependent hydrolase
Position: -68
Score: 5.6
Sequence: TACTGTATAAAAAACCAGTT
Position: -46
Score: 5.3
Sequence: TACTGTATTTAATTACAGTC
Position: -28
Score: 4.5
Sequence: TCATGGTTTTTCATACAGGA
Locus tag: STM2684
Name: recN
Funciton: DNA repair protein RecN
STM2684
recN
DNA repair protein RecN
Position: -93
Score: 5.6
Sequence: TACTGTTTTTTCATCCAGTA
Locus tag: STM0798
Name: uvrB
Funciton: Excinuclease ABC subunit B
STM0798
uvrB
Excinuclease ABC subunit B
Position: -39
Score: 6.1
Sequence: AACTGTATATATATCCAGTA
Locus tag: STM1162
Name: dinI
Funciton: DNA damage-inducible protein
STM1162
dinI
DNA damage-inducible protein
Position: -71
Score: 4.8
Sequence: ATCTGGATAAACATCCAGTC
Locus tag: STM1895
Name: ruvA
Funciton: Holliday junction helicase subunit A
Locus tag: STM1894
Name: ruvB
Funciton: Holliday junction DNA helicase B
STM1895
ruvA
Holliday junction helicase subunit A
STM1894
ruvB
Holliday junction DNA helicase B
Position: -37
Score: 5.5
Sequence: TACTGTATATAAACACAGGT
Locus tag: STM1882
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
STM1882
yebG
SOS regulon DNA damage-inducible protein
Position: -167
Score: 5.7
Sequence: ACCTGTTTGAATATACAGTA
Locus tag: STM4256
Name: ssb
Funciton: single-strand binding protein
STM4256
ssb
single-strand binding protein
Position: -34
Score: 4.8
Sequence: TAGTGGCTGTTTATACAGTA
Locus tag: STM0821
Name: dinG
Funciton: ATP-dependent helicase DinG/Rad3
STM0821
dinG
ATP-dependent helicase DinG/Rad3
Position: -6
Score: 5.5
Sequence: TACTGGATGAATAACCAGTT
Locus tag: STM1309
Name: cho
Funciton: endonuclease of nucleotide excision repair
STM1309
cho
endonuclease of nucleotide excision repair
Position: -70
Score: 4.9
Sequence: TGCTGTTTTTATAAACAATG
Locus tag: STM3212
Name: mug
Funciton: DNA glycosylase, G/U mismatch specific
STM3212
mug
DNA glycosylase, G/U mismatch specific
Position: -35
Score: 6
Sequence: TACTGTATATACAAACAGTT
Locus tag: STM1056
Name: dinI
Funciton: DNA damage-inducible protein
STM1056
dinI
DNA damage-inducible protein
Position: -39
Score: 5.7
Sequence: TACTGTGTTTATATACAGTG
Locus tag: STM2621
Name: dinI
Funciton: DNA damage-inducible protein
STM2621
dinI
DNA damage-inducible protein
Position: -39
Score: 5.7
Sequence: TACTGTGTTTATATACAGTG
Locus tag: STM1019
Name: dinI
Funciton: DNA damage-inducible protein
STM1019
dinI
DNA damage-inducible protein
Position: -37
Score: 5.2
Sequence: TGCTGTATATAAAAACAGGC
Locus tag: PSLT055
Name: samA
Funciton: UV protection protein
Locus tag: PSLT054
Name: samB
Funciton: UV protection protein
PSLT055
samA
UV protection protein
PSLT054
samB
UV protection protein
Position: -94
Score: 4.4
Sequence: TACTGATGTTATGTACAGGT
Locus tag: STM4523
Name: yjiW
Funciton: LexA regulated, putative SOS response
STM4523
yjiW
LexA regulated, putative SOS response
Position: -100
Score: 5.7
Sequence: TACTGTATATTCAAACAGGT
Locus tag: STM4254
Name: uvrA
Funciton: excinuclease ABC subunit A
STM4254
uvrA
excinuclease ABC subunit A
Position: -73
Score: 4.6
Sequence: gcCTGTAcAaAataACAGTA
Locus tag: STM0097
Name: polB
Funciton: DNA polymerase II (EC 2.7.7.7)
STM0097
polB
DNA polymerase II (EC 2.7.7.7)
Position: -35
Score: 6.1
Sequence: TACTGTATATAAAAACAGTA
Locus tag: STM1998
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: STM1997
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
STM1998
umuD
DNA polymerase V, subunit UmuD
STM1997
umuC
DNA polymerase V, subunit UmuC
Position: -41
Score: 5.5
Sequence: TACTGTACATTCATACAGCA
Locus tag: STM2061
Name: sbmC
Funciton: DNA gyrase inhibitor
STM2061
sbmC
DNA gyrase inhibitor
Position: -197
Score: 3.8
Sequence: TACCGGATAGCAGTACAGGC
Locus tag: STM0309
Name: yafH
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
STM0309
yafH
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -64
Score: 5.2
Sequence: AACTGGACGTTTATACAGCA
Locus tag: STM3969
Name: rmuC
Funciton: DNA recombination protein RmuC
STM3969
rmuC
DNA recombination protein RmuC
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