Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Erwinia carotovora subsp. atroseptica SCRI1043

Properties
Regulator type: Transcription factor
TF locus tag: ECA0630
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Enterobacteriales
Statistics of regulated genes:
- Genes 17
- Operons 15
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 265 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -71
Score: 4.5
Sequence: ATCTGTATAAATCACCAGTG
Locus tag: ECA4179
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -101
Score: 5.7
Sequence: TGCTGTATGTGTATACAGTA
Locus tag: ECA3369
Name: recA
Funciton: Recombinase A
Locus tag: ECA3368
Name: recX
Funciton: regulatory protein RecX
recA
Recombinase A
recX
regulatory protein RecX

Position: -41
Score: 6.1
Sequence: TACTGTATGTTCATACAGTA
Locus tag: ECA1752
Name: sulA
Funciton: Cell division inhibitor sulA
sulA
Cell division inhibitor sulA

Position: -47
Score: 5
Sequence: ACCTGTATATACTCACAGCA
Position: -26
Score: 5
Sequence: GACTGTATAAACAACCAGGG
Locus tag: ECA0630
Name: lexA
Funciton: LexA repressor
lexA
LexA repressor

Position: -36
Score: 5.5
Sequence: ATCTGTATATTCATACAGTA
Locus tag: ECA3468
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinB
DNA polymerase IV (EC 2.7.7.7)

Position: -78
Score: 5
Sequence: TCCTGTGAATTTATACAGTC
Locus tag: ECA2647
Name: ftsK
Funciton: DNA translocase FtsK
ftsK
DNA translocase FtsK

Position: -36
Score: 5.4
Sequence: TACTGTATAAAATAACAGTT
Locus tag: ECA2409
Name: ydjM
Funciton: membrane-bound metal-dependent hydrolase
ydjM
membrane-bound metal-dependent hydrolase

Position: -61
Score: 5.7
Sequence: TACTGTATATAAAACCAGTT
Position: -39
Score: 5.4
Sequence: TACTGTATGTAAACACAGTC
Locus tag: ECA0840
Name: recN
Funciton: DNA repair protein RecN
recN
DNA repair protein RecN

Position: -232
Score: 5.6
Sequence: TgCTGTtTtTATATcCAGTA
Locus tag: ECA2820
Name: uvrB
Funciton: Excinuclease ABC subunit B
uvrB
Excinuclease ABC subunit B

Position: -38
Score: 5.9
Sequence: AACTGTATAAATAAACAGTT
Locus tag: ECA1786
Name: dinI
Funciton: DNA damage-inducible protein
dinI
DNA damage-inducible protein

Position: -84
Score: 4.9
Sequence: TGCTGGATATTCATCCAGCC
Locus tag: ECA2492
Name: ruvA
Funciton: Holliday junction helicase subunit A
Locus tag: ECA2491
Name: ruvB
Funciton: Holliday junction DNA helicase B
ruvA
Holliday junction helicase subunit A
ruvB
Holliday junction DNA helicase B

Position: -115
Score: 4.9
Sequence: CGCTGGTTGCATATACAGCA
Locus tag: ECA0082
Name: tag
Funciton: DNA-3-methyladenine glycosylase I
tag
DNA-3-methyladenine glycosylase I

Position: -158
Score: 5.5
Sequence: AACTGAATGAATATCCAGTA
Locus tag: ECA3690
Name: ssb
Funciton: single-strand binding protein
ssb
single-strand binding protein

Position: -107
Score: 5.5
Sequence: TACTGGATATTCATTCAGTT
Locus tag: ECA3689
Name: uvrA
Funciton: excinuclease ABC subunit A
uvrA
excinuclease ABC subunit A

Position: -64
Score: 4.9
Sequence: TTCTGGACATCCATACAGTA
Locus tag: ECA0195
Name: rmuC
Funciton: DNA recombination protein RmuC
rmuC
DNA recombination protein RmuC
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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