Regulon of LexA in Erwinia amylovora ATCC 49946

Properties
Regulator type:	Transcription factor
TF locus tag:	EAM_0264
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Enterobacteriales
Statistics of regulated genes:
- Genes	22
- Operons	19
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 265 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -171 Score: 4.5 Sequence: GCCTGAATGGATAACCAGTG Locus tag: EAM_0308 Name: ssb Funciton: single-strand binding protein
	EAM_0308	ssb	single-strand binding protein
Position: -88 Score: 6.1 Sequence: TACTGTATGATTATACAGTA Locus tag: EAM_2640 Name: recA Funciton: Recombinase A
	EAM_2640	recA	Recombinase A
Position: -55 Score: 5 Sequence: ACCTGGTTATTTAACCAGTG Locus tag: EAM_0187 Name: uvrD Funciton: ATP-dependent DNA helicase II
	EAM_0187	uvrD	ATP-dependent DNA helicase II
Position: -40 Score: 5.7 Sequence: TACTGTATATCCATACAGTC Locus tag: EAM_1378 Name: sulA Funciton: Cell division inhibitor sulA
	EAM_1378	sulA	Cell division inhibitor sulA
Position: -36 Score: 5.4 Sequence: GACTGTATACTTATCCAGTA Locus tag: EAM_0894 Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7)
	EAM_0894	dinB	DNA polymerase IV (EC 2.7.7.7)
Position: -46 Score: 4.9 Sequence: ACCTGTATATACTCACAGTC Position: -26 Score: 5 Sequence: GACTGTATAAACAACCAGGG Locus tag: EAM_0264 Name: lexA Funciton: LexA repressor Locus tag: EAM_0265 Name: dinF Funciton: DNA-damage-inducible SOS response protein
	EAM_0264	lexA	LexA repressor
	EAM_0265	dinF	DNA-damage-inducible SOS response protein
Position: -80 Score: 4.9 Sequence: TCCTGTGAATTCATACAGGT Locus tag: EAM_1329 Name: ftsK Funciton: DNA translocase FtsK
	EAM_1329	ftsK	DNA translocase FtsK
Position: -56 Score: 4.3 Sequence: TACTGTATATATTCCCTATA Position: -38 Score: 4.8 Sequence: TACTGGATGCATTGACAGTT Locus tag: EAM_1619 Name: ydjM Funciton: membrane-bound metal-dependent hydrolase
	EAM_1619	ydjM	membrane-bound metal-dependent hydrolase
Position: -68 Score: 5.7 Sequence: TACTGTTTATAAAACCAGTA Position: -46 Score: 4.3 Sequence: TACTGTATGAAAAACCATAT Position: -28 Score: 4.8 Sequence: ATCTGTGTTTTCATACAGGA Locus tag: EAM_2529 Name: recN Funciton: DNA repair protein RecN
	EAM_2529	recN	DNA repair protein RecN
Position: -96 Score: 4.7 Sequence: AGCTGTGATTATATCCAGTG Locus tag: EAM_1216 Name: uvrB Funciton: Excinuclease ABC subunit B
	EAM_1216	uvrB	Excinuclease ABC subunit B
Position: -68 Score: 5 Sequence: AGCTGGATATCTATCCAGCT Locus tag: EAM_2004 Name: ruvA Funciton: Holliday junction helicase subunit A Locus tag: EAM_2003 Name: ruvB Funciton: Holliday junction DNA helicase B
	EAM_2004	ruvA	Holliday junction helicase subunit A
	EAM_2003	ruvB	Holliday junction DNA helicase B
Position: -38 Score: 5.8 Sequence: AACTGTATATATTTACAGTT Locus tag: EAM_1429 Name: dinI Funciton: DNA damage-inducible protein
	EAM_1429	dinI	DNA damage-inducible protein
Position: -35 Score: 5.7 Sequence: TACTGTATAAAAACACAGTT Locus tag: EAM_1993 Name: yebG Funciton: SOS regulon DNA damage-inducible protein
	EAM_1993	yebG	SOS regulon DNA damage-inducible protein
Position: -43 Score: 4.8 Sequence: TACTGTGCAAAAATACAGCC Locus tag: EAM_1250 Name: dinG Funciton: ATP-dependent helicase DinG/Rad3
	EAM_1250	dinG	ATP-dependent helicase DinG/Rad3
Position: -33 Score: 5.3 Sequence: TACTGTTCGGATAAACAGTA Locus tag: EAM_1613 Name: cho Funciton: endonuclease of nucleotide excision repair
	EAM_1613	cho	endonuclease of nucleotide excision repair
Position: -35 Score: 6 Sequence: TACTGTATATGCATACAGTA Locus tag: EAM_P216 Name: samA Funciton: UV protection protein Locus tag: EAM_P215 Name: samB Funciton: UV protection protein
	EAM_P216	samA	UV protection protein
	EAM_P215	samB	UV protection protein
Position: -101 Score: 4.5 Sequence: CACTGGTTATCCATTCAGGC Locus tag: EAM_0307 Name: uvrA Funciton: excinuclease ABC subunit A
	EAM_0307	uvrA	excinuclease ABC subunit A
Position: -53 Score: 4.9 Sequence: TACTGTATAAATAAACATGC Locus tag: EAM_0673 Name: polB Funciton: DNA polymerase II (EC 2.7.7.7)
	EAM_0673	polB	DNA polymerase II (EC 2.7.7.7)
Position: -64 Score: 4.5 Sequence: GTCTGGACATTTATACAGTG Locus tag: EAM_0201 Name: rmuC Funciton: DNA recombination protein RmuC
	EAM_0201	rmuC	DNA recombination protein RmuC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Erwinia amylovora ATCC 49946

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --