Regulon of TnrA in Oceanobacillus iheyensis HTE831
| Regulator type: | Transcription factor |
| TF locus tag: | OB0950 |
| Regulator family: | MerR |
| Regulation mode: | repressor (activator) |
| Biological process: | Nitrogen assimilation |
| Effector: | NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase |
| Regulog: | TnrA - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 27 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - MerR
- By effector - NrgB, ammonium uptake protein
- By effector - NrgA, ammonium uptake protein
- By effector - Feedback-inhibited GlnA, glutamine synthetase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
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Position: -80
Score: 5.1 Sequence: TGTTAGAAATACTAACA
Position: -57
Score: 4.3 Sequence: TGACATATAAGCTGACG
Locus tag: OB1650
Name: glnR Funciton: Transcriptional regulator of nitrogen excess response, MerR family
Locus tag: OB1651
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnR
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Transcriptional regulator of nitrogen excess response, MerR family
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -678
Score: 4.6 Sequence: TGTTAAATAATGTAACG
Locus tag: OB0021
Name: gltT Funciton: H(+)/sodium-glutamate symporter |
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gltT
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H(+)/sodium-glutamate symporter
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Position: -639
Score: 5.1 Sequence: TGTAAGGTTTTCTTACA
Position: -531
Score: 4.3 Sequence: ATTCATAAAATCTGACA
Locus tag: OB2623
Name: ilvB Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: OB2622
Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: OB2621
Name: ilvC Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: OB2620
Name: leuA Funciton: 2-isopropylmalate synthase (EC 2.3.3.13)
Locus tag: OB2619
Name: leuB Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Locus tag: OB2618
Name: leuC Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Locus tag: OB2617
Name: leuD Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
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ilvB
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Acetolactate synthase large subunit (EC 2.2.1.6)
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ilvH
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Acetolactate synthase small subunit (EC 2.2.1.6)
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ilvC
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Ketol-acid reductoisomerase (EC 1.1.1.86)
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leuA
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2-isopropylmalate synthase (EC 2.3.3.13)
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leuB
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3-isopropylmalate dehydrogenase (EC 1.1.1.85)
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leuC
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3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
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leuD
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3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
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Position: -469
Score: 4.3 Sequence: TGTAATATTTTATGAAG
Position: -325
Score: 3.9 Sequence: TGTTAATTTTTATCAAA
Locus tag: OB2615
Name: oppD Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: OB2614
Name: oppF Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: OB2613
Name: appB Funciton: Oligopeptide ABC transporter (permease)
Locus tag: OB2612
Name: oppC Funciton: Oligopeptide ABC transporter permease
Locus tag: OB2611
Name: oppA Funciton: Oligopeptide ABC transporter substrate-binding protein |
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oppD
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Oligopeptide ABC transporter ATP-binding protein
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oppF
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Oligopeptide ABC transporter ATP-binding protein
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appB
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Oligopeptide ABC transporter (permease)
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oppC
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Oligopeptide ABC transporter permease
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oppA
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Oligopeptide ABC transporter substrate-binding protein
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Position: -146
Score: 4.4 Sequence: TGTCGAATTTTGTAACA
Locus tag: OB2264
Name: appD Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: OB2263
Name: appF Funciton: oligopeptide ABC transporter (ATP-binding protein)
Locus tag: OB2262
Name: appA Funciton: Oligopeptide ABC transporter (substrate-binding)
Locus tag: OB2261
Name: appB Funciton: Oligopeptide ABC transporter (permease)
Locus tag: OB2260
Name: appC Funciton: Oligopeptide ABC transporter (permease) |
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appD
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Oligopeptide ABC transporter (ATP-binding protein)
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appF
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oligopeptide ABC transporter (ATP-binding protein)
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appA
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Oligopeptide ABC transporter (substrate-binding)
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appB
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Oligopeptide ABC transporter (permease)
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appC
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Oligopeptide ABC transporter (permease)
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Position: -98
Score: 4 Sequence: TTTACGATTATGTAACA
Locus tag: OB1740
Name: thyB Funciton: Thymidylate synthase (EC 2.1.1.45)
Locus tag: OB1739
Name: dfrA Funciton: Dihydrofolate reductase (EC 1.5.1.3) |
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thyB
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Thymidylate synthase (EC 2.1.1.45)
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dfrA
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Dihydrofolate reductase (EC 1.5.1.3)
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Position: -381
Score: 3.9 Sequence: TGTTATTTTATGTTCCT
Locus tag: OB3382
Name: ycsI Funciton: Hypothetical protein |
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ycsI
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Hypothetical protein
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Position: -596
Score: 4.7 Sequence: TGTTATAATAATTAACA
Position: -253
Score: 4 Sequence: TCTAAGAAATTATAAAA
Locus tag: OB0268
Name: yycB Funciton: Cyanate MFS transporter |
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yycB
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Cyanate MFS transporter
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Position: -37
Score: 3.6 Sequence: AGAAAGAATTACTATCA
Locus tag: OB2519
Name: degU Funciton: Transcriptional regulator essential for degradative enzyme expression and competence regulation, OmpR family |
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degU
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Transcriptional regulator essential for degradative enzyme expression and competence regulation, OmpR family
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Position: -60
Score: 3.4 Sequence: TGATAATTTACATAACC
Position: -38
Score: 5.2 Sequence: TGTTAGGAAATCTAACA
Position: -31
Score: 3.7 Sequence: TTTTATAAATTATAAAG
Locus tag: OB1212
Name: nrgB2 Funciton: Nitrogen regulatory protein P-II
Locus tag: OB1211
Name: nrgA2 Funciton: Ammonium transporter |
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nrgB2
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Nitrogen regulatory protein P-II
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nrgA2
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Ammonium transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |