Regulon of NtcB in Trichodesmium erythraeum IMS101

Properties
Regulator type:	Transcription factor
TF locus tag:	Tery_4333
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Nitrite
Regulog:	NtcB - Cyanobacteria
Statistics of regulated genes:
- Genes	6
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By effector - Nitrite
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -250 Score: 4.7 Sequence: ATGTAATAAATGCAT Locus tag: Tery_1068 Name: nirA Funciton: ferredoxin--nitrite reductase Locus tag: Tery_1069 Name: nrtP Funciton: nitrate/nitrite transporter Locus tag: Tery_1070 Name: narB Funciton: nitrate reductase
	Tery_1068	nirA	ferredoxin--nitrite reductase
	Tery_1069	nrtP	nitrate/nitrite transporter
	Tery_1070	narB	nitrate reductase
Position: -87 Score: 4.1 Sequence: ATGAAATATTTATAT Locus tag: Tery_4333 Name: ntcB Funciton: nitrogen assimilation transcriptional activator NtcB
	Tery_4333	ntcB	nitrogen assimilation transcriptional activator NtcB
Position: -33 Score: 4.2 Sequence: ATGCAGTTTATTCAA Locus tag: Tery_3506 Name: psbL Funciton: photosystem II protein L Locus tag: Tery_3507 Name: psbJ Funciton: photosystem II protein J
	Tery_3506	psbL	photosystem II protein L
	Tery_3507	psbJ	photosystem II protein J

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD