Regulon of NtcB in Trichodesmium erythraeum IMS101
| Regulator type: | Transcription factor |
| TF locus tag: | Tery_4333 |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Nitrite |
| Regulog: | NtcB - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By effector - Nitrite
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -250
Score: 4.7 Sequence: ATGTAATAAATGCAT
Locus tag: Tery_1068
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: Tery_1069
Name: nrtP Funciton: nitrate/nitrite transporter
Locus tag: Tery_1070
Name: narB Funciton: nitrate reductase |
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nirA
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ferredoxin--nitrite reductase
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nrtP
|
nitrate/nitrite transporter
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narB
|
nitrate reductase
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Position: -87
Score: 4.1 Sequence: ATGAAATATTTATAT
Locus tag: Tery_4333
Name: ntcB Funciton: nitrogen assimilation transcriptional activator NtcB |
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ntcB
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nitrogen assimilation transcriptional activator NtcB
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Position: -33
Score: 4.2 Sequence: ATGCAGTTTATTCAA
Locus tag: Tery_3506
Name: psbL Funciton: photosystem II protein L
Locus tag: Tery_3507
Name: psbJ Funciton: photosystem II protein J |
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psbL
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photosystem II protein L
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psbJ
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photosystem II protein J
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |