Regulon of NtcB in Synechocystis sp. PCC 6803

Properties
Regulator type:	Transcription factor
TF locus tag:	slr0395
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Nitrite
Regulog:	NtcB - Cyanobacteria
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By effector - Nitrite
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -125 Score: 4.9 Sequence: ATGCAGTAATCGCAT Locus tag: sll1450 Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein Locus tag: sll1451 Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein Locus tag: sll1452 Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein Locus tag: sll1453 Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein Locus tag: sll1454 Name: narB Funciton: nitrate reductase
	sll1450	nrtA	nitrate/nitrite ABC transport system, substrate-binding protein
	sll1451	nrtB	nitrate/nitrite ABC transport system, permease protein
	sll1452	nrtC	nitrate/nitrite ABC transport system, ATP-binding protein
	sll1453	nrtD	nitrate/nitrite ABC transport system, ATP-binding protein
	sll1454	narB	nitrate reductase
Position: -103 Score: 4.8 Sequence: ATGCGTAAACTGCAT Locus tag: slr0898 Name: nirA Funciton: ferredoxin--nitrite reductase
	slr0898	nirA	ferredoxin--nitrite reductase
Position: -187 Score: 4 Sequence: ATGGATTCTTTTCAT Locus tag: slr0395 Name: ntcB Funciton: nitrogen assimilation transcriptional activator NtcB
	slr0395	ntcB	nitrogen assimilation transcriptional activator NtcB
Position: -30 Score: 4.3 Sequence: ATGCAATTTATTCAA Locus tag: smr0007 Name: psbL Funciton: photosystem II protein L Locus tag: smr0008 Name: psbJ Funciton: photosystem II protein J
	smr0007	psbL	photosystem II protein L
	smr0008	psbJ	photosystem II protein J

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