Regulon of NtcA in Gloeobacter violaceus PCC 7421
| Regulator type: | Transcription factor |
| TF locus tag: | gvip454 |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Nitrogen assimilation |
| Effector: | 2-oxoglutarate |
| Regulog: | NtcA - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 6 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - CRP
- By effector - 2-oxoglutarate
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -116
Score: 4 Sequence: CGTATCTCAGACTACA
Locus tag: gvip146
Name: glnA Funciton: glutamine synthetase, type I |
|||
|
glnA
|
glutamine synthetase, type I
|
||
|
Position: -146
Score: 4 Sequence: TGTATCTGGGGTTACG
Locus tag: gvip212
Name: nirA Funciton: Nitrite reductase, ferredoxin dependent |
|||
|
nirA
|
Nitrite reductase, ferredoxin dependent
|
||
|
Position: -77
Score: 3.9 Sequence: AGTAGTCCCTAATACA
Locus tag: gvip454
Name: ntcA Funciton: Global nitrogen transcription regulator, Crp family |
|||
|
ntcA
|
Global nitrogen transcription regulator, Crp family
|
||
|
Position: -46
Score: 4 Sequence: CGTAACCCCAGATACA
Locus tag: gvip213
Name: ntcB Funciton: Nitrogen assimilation transcriptional activator, LysR family |
|||
|
ntcB
|
Nitrogen assimilation transcriptional activator, LysR family
|
||
|
Position: -116
Score: 3.9 Sequence: TGTAACAAATTGTAGA
Locus tag: glr3304
Name: fur Funciton: Ferric uptake regulator, Fur family |
|||
|
fur
|
Ferric uptake regulator, Fur family
|
||
|
Position: -379
Score: 3.6 Sequence: TGTATCTAGAACTAGC
Locus tag: gll0880
Name: trxA Funciton: Thioredoxin-1 |
|||
|
trxA
|
Thioredoxin-1
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |