Regulon of NtcA in Gloeobacter violaceus PCC 7421

Properties
Regulator type:	Transcription factor
TF locus tag:	gvip454
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Regulog:	NtcA - Cyanobacteria
Statistics of regulated genes:
- Genes	6
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 228 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - CRP
By effector - 2-oxoglutarate
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -116 Score: 4 Sequence: CGTATCTCAGACTACA Locus tag: gvip146 Name: glnA Funciton: glutamine synthetase, type I
	gvip146	glnA	glutamine synthetase, type I
Position: -146 Score: 4 Sequence: TGTATCTGGGGTTACG Locus tag: gvip212 Name: nirA Funciton: Nitrite reductase, ferredoxin dependent
	gvip212	nirA	Nitrite reductase, ferredoxin dependent
Position: -77 Score: 3.9 Sequence: AGTAGTCCCTAATACA Locus tag: gvip454 Name: ntcA Funciton: Global nitrogen transcription regulator, Crp family
	gvip454	ntcA	Global nitrogen transcription regulator, Crp family
Position: -46 Score: 4 Sequence: CGTAACCCCAGATACA Locus tag: gvip213 Name: ntcB Funciton: Nitrogen assimilation transcriptional activator, LysR family
	gvip213	ntcB	Nitrogen assimilation transcriptional activator, LysR family
Position: -116 Score: 3.9 Sequence: TGTAACAAATTGTAGA Locus tag: glr3304 Name: fur Funciton: Ferric uptake regulator, Fur family
	glr3304	fur	Ferric uptake regulator, Fur family
Position: -379 Score: 3.6 Sequence: TGTATCTAGAACTAGC Locus tag: gll0880 Name: trxA Funciton: Thioredoxin-1
	gll0880	trxA	Thioredoxin-1

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD