Regulon of NtcA in Synechococcus sp. WH 8102

Properties
Regulator type:	Transcription factor
TF locus tag:	SYNW0275
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Regulog:	NtcA - Cyanobacteria
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 228 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - CRP
By effector - 2-oxoglutarate
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -100 Score: 4.2 Sequence: TGTATCAATTAACACA Locus tag: SYNW0253 Name: amt1 Funciton: ammonium transporter
	SYNW0253	amt1	ammonium transporter
Position: -143 Score: 4.1 Sequence: TGTAACTTTGGTTGCA Locus tag: SYNW0246 Name: SYNPCC7002_A1954 Funciton: putative two-component sensor histidine kinase
	SYNW0246	SYNPCC7002_A1954	putative two-component sensor histidine kinase
Position: -103 Score: 4.1 Sequence: TGTAGCAAGTGAGACA Position: -66 Score: 4.5 Sequence: AGTATCACCTGATACA Locus tag: SYNW2487 Name: cynA Funciton: cyanate ABC transporter, substrate binding protein Locus tag: SYNW2486 Name: cynB Funciton: cyanate ABC transporter, permease protein Locus tag: SYNW2485 Name: cynD Funciton: cyanate ABC transporter, ATP-binding protein
	SYNW2487	cynA	cyanate ABC transporter, substrate binding protein
	SYNW2486	cynB	cyanate ABC transporter, permease protein
	SYNW2485	cynD	cyanate ABC transporter, ATP-binding protein
Position: -118 Score: 4 Sequence: TGTTGCAACAGCTACC Locus tag: SYNW2442 Name: urtA Funciton: Urea ABC transporter, substrate-binding protein Locus tag: SYNW2441 Name: urtB Funciton: Urea ABC transporter, permease protein 1 Locus tag: SYNW2440 Name: urtC Funciton: Urea ABC transporter, permease protein 2 Locus tag: SYNW2439 Name: urtD Funciton: Urea ABC transporter, ATP-binding protein 1 Locus tag: SYNW2438 Name: urtE Funciton: Urea ABC transporter, ATP-binding protein 2
	SYNW2442	urtA	Urea ABC transporter, substrate-binding protein
	SYNW2441	urtB	Urea ABC transporter, permease protein 1
	SYNW2440	urtC	Urea ABC transporter, permease protein 2
	SYNW2439	urtD	Urea ABC transporter, ATP-binding protein 1
	SYNW2438	urtE	Urea ABC transporter, ATP-binding protein 2

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD