Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdaR in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b0162
Regulator family: SdaR
Regulation mode: activator
Biological process: Glucarate utilization; Galactarate utilization
Effector: Glycerate
Regulog: SdaR - Enterobacteriales
Statistics of regulated genes:
- Genes 9
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 31 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -69
Score: 5.3
Sequence: CTTTAGGCATTTGCACAATG
Locus tag: b0162
Name: sdaR
Funciton: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family
sdaR
Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family

Position: -186
Score: 6
Sequence: TTATGTGCATATGCTCAAAA
Position: -144
Score: 4.5
Sequence: AAATTAGCATTTGCACAATG
Locus tag: b3127
Name: garP
Funciton: D-galactarate permease, MFS family
Locus tag: b3126
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: b3125
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: b3124
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
garP
D-galactarate permease, MFS family
garL
2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
garR
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
garK
Glycerate kinase (EC 2.7.1.31)

Position: -385
Score: 4.7
Sequence: TTTCAGGCAAATGCCAGTAA
Locus tag: b2789
Name: gudP
Funciton: D-glucarate permease, MFS family
Locus tag: b2788
Name: gudX
Funciton: Glucarate dehydratase related protein (EC 4.2.1.-)
Locus tag: b2787
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
gudP
D-glucarate permease, MFS family
gudX
Glucarate dehydratase related protein (EC 4.2.1.-)
gudD
Glucarate dehydratase (EC 4.2.1.40)

Position: -250
Score: 4.5
Sequence: CATTGTGCAAATGCTAATTT
Position: -208
Score: 6
Sequence: TTTTGAGCATATGCACATAA
Locus tag: b3128
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD
D-galactarate dehydratase (EC 4.2.1.42)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD