Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdaR in Erwinia carotovora subsp. atroseptica SCRI1043

Properties
Regulator type: Transcription factor
TF locus tag: ECA3300
Regulator family: SdaR
Regulation mode: activator
Biological process: Glucarate utilization; Galactarate utilization
Effector: Glycerate
Regulog: SdaR - Enterobacteriales
Statistics of regulated genes:
- Genes 8
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 31 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -80
Score: 4.3
Sequence: CTTTGTTAATTTGCACAATG
Locus tag: ECA3300
Name: sdaR
Funciton: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family
sdaR
Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family

Position: -358
Score: 4.1
Sequence: TGCTGGGCTATTGCCCAATG
Locus tag: ECA3576
Name: gudX
Funciton: Glucarate dehydratase related protein (EC 4.2.1.-)
Locus tag: ECA3575
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: ECA3574
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: ECA3573
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: ECA3572
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
gudX
Glucarate dehydratase related protein (EC 4.2.1.-)
gudD
Glucarate dehydratase (EC 4.2.1.40)
garL
2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
garR
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
garK
Glycerate kinase (EC 2.7.1.31)

Position: -440
Score: 4.2
Sequence: CATTATGCAATTGACCTAAG
Position: -264
Score: 4.6
Sequence: TATAGGGCAAGTGCACCAAC
Locus tag: ECA3577
Name: gudP
Funciton: D-glucarate permease, MFS family
gudP
D-glucarate permease, MFS family

Position: -316
Score: 4.6
Sequence: GTTGGTGCACTTGCCCTATA
Position: -140
Score: 4.2
Sequence: CTTAGGTCAATTGCATAATG
Locus tag: ECA3578
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD
D-galactarate dehydratase (EC 4.2.1.42)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD