Regulon of SdaR in Citrobacter koseri ATCC BAA-895

Properties
Regulator type:	Transcription factor
TF locus tag:	CKO_03205
Regulator family:	SdaR
Regulation mode:	activator
Biological process:	Glucarate utilization; Galactarate utilization
Effector:	Glycerate
Regulog:	SdaR - Enterobacteriales
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - SdaR
By TF family - SdaR
By effector - Glycerate
By pathway - Glucarate utilization
By pathway - Galactarate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -203 Score: 5.6 Sequence: CGTTGTGCAAATGCTCAAAA Locus tag: CKO_04523 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: CKO_04522 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: CKO_04521 Name: garK Funciton: Glycerate kinase (EC 2.7.1.31)
	CKO_04523	garL	2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
	CKO_04522	garR	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
	CKO_04521	garK	Glycerate kinase (EC 2.7.1.31)
Position: -388 Score: 4.9 Sequence: CATCAGGCATTTGCCCTAAA Locus tag: CKO_04143 Name: gudP Funciton: D-glucarate permease, MFS family Locus tag: CKO_04142 Name: gudX Funciton: Glucarate dehydratase related protein (EC 4.2.1.-) Locus tag: CKO_04141 Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40) Locus tag: CKO_04140 Name: garK Funciton: Glycerate kinase (EC 2.7.1.31)
	CKO_04143	gudP	D-glucarate permease, MFS family
	CKO_04142	gudX	Glucarate dehydratase related protein (EC 4.2.1.-)
	CKO_04141	gudD	Glucarate dehydratase (EC 4.2.1.40)
	CKO_04140	garK	Glycerate kinase (EC 2.7.1.31)
Position: -17 Score: 5.1 Sequence: GTTTGTGCAGATGCACAATG Locus tag: CKO_03205 Name: sdaR Funciton: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family
	CKO_03205	sdaR	Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family
Position: -223 Score: 5.6 Sequence: TTTTGAGCATTTGCACAACG Locus tag: CKO_04527 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
	CKO_04527	garD	D-galactarate dehydratase (EC 4.2.1.42)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD