Regulon of GalR/GalS in Erwinia carotovora subsp. atroseptica SCRI1043
| Regulator type: | Transcription factor |
| TF locus tag: | ECA3172 |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Galactose utilization |
| Effector: | Galactose |
| Regulog: | GalR/GalS - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - LacI
- By effector - Galactose
- By pathway - Galactose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -240
Score: 5.3 Sequence: AAGTGTAATCGGTTACCCTA
Locus tag: ECA3172
Name: galR Funciton: galactose operon repressor galR |
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galR
|
galactose operon repressor galR
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Position: -335
Score: 5.6 Sequence: TGGTGTAACCGTTTGCACAA
Position: -229
Score: 4.8 Sequence: TGGTGTAACCGTTACCCTAG
Locus tag: ECA3175
Name: ganE Funciton: oligogalactan ABC transporter, substrate-binding periplasmic protein
Locus tag: ECA3176
Name: ganF Funciton: oligogalactan ABC transporter, permease protein
Locus tag: ECA3177
Name: ganG Funciton: oligogalactan ABC transporter, permease protein
Locus tag: ECA3178
Name: ganA Funciton: galactanase
Locus tag: ECA3179
Name: lacA Funciton: beta-galactosidase |
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ganE
|
oligogalactan ABC transporter, substrate-binding periplasmic protein
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ganF
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oligogalactan ABC transporter, permease protein
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ganG
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oligogalactan ABC transporter, permease protein
|
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ganA
|
galactanase
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lacA
|
beta-galactosidase
|
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Position: -178
Score: 5.3 Sequence: TTGTGCAAACGGTTACACCA
Locus tag: ECA3174
Name: ganK Funciton: oligogalactan ABC transporter, ATP-binding protein |
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ganK
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oligogalactan ABC transporter, ATP-binding protein
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Position: -64
Score: 5 Sequence: AAAAGTAATCGATTACATTT
Position: -34
Score: 5.1 Sequence: GATTGTAATCGATTACTTTT
Locus tag: ECA1400
Name: ECA1400 Funciton: putative nucleoside H+ symporter
Locus tag: ECA1399
Name: ECA1399 Funciton: putative xylose isomerase-like TIM barrel
Locus tag: ECA1398
Name: ECA1398 Funciton: putative NADH-dependent dehydrogenase |
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ECA1400
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putative nucleoside H+ symporter
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ECA1399
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putative xylose isomerase-like TIM barrel
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ECA1398
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putative NADH-dependent dehydrogenase
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Position: -240
Score: 6 Sequence: TAGGGTAACCGATTACACTT
Position: -152
Score: 5 Sequence: TAGTGAAACTGATTACATTG
Locus tag: ECA3171
Name: galT Funciton: galactose-1-phosphate uridylyltransferase
Locus tag: ECA3170
Name: galK Funciton: galactokinase |
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galT
|
galactose-1-phosphate uridylyltransferase
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galK
|
galactokinase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |