Regulon of Fur in Photorhabdus luminescens subsp. laumondii TTO1

Properties
Regulator type:	Transcription factor
TF locus tag:	plu1327
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Enterobacteriales
Statistics of regulated genes:
- Genes	72
- Operons	28
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 656 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -191 Score: 3.9 Sequence: ccaAtcaATAATaATTATC Position: -185 Score: 4.4 Sequence: AATAATAATTATCACTGAC Locus tag: plu2496 Name: adhE Funciton: iron-containing aldehyde-alcohol dehydrogenase
	plu2496	adhE	iron-containing aldehyde-alcohol dehydrogenase
Position: -106 Score: 4.2 Sequence: GGTTTTCATTTTCATTAGC Locus tag: plu1327 Name: fur Funciton: ferric uptake transcription regulator
	plu1327	fur	ferric uptake transcription regulator
Position: -223 Score: 4 Sequence: GAACTTTATATTCATTAGC Locus tag: plu3626 Name: null Funciton: null Locus tag: plu3625 Name: null Funciton: lipoprotein
	plu3626		null
	plu3625		lipoprotein
Position: -62 Score: 5.3 Sequence: GAAAATAATAATCATTTTC Position: -56 Score: 4.6 Sequence: AATAATCATTTTCATTTAT Locus tag: plu1235 Name: fecI Funciton: ECF-family RNA polymerase sigma factor fecI
	plu1235	fecI	ECF-family RNA polymerase sigma factor fecI
Position: -141 Score: 4 Sequence: ACAGATGATAATGGTTATC Position: -135 Score: 4.3 Sequence: GATAATGGTTATCAATACG Locus tag: plu2587 Name: sapA Funciton: ABC peptide transport periplasmic protein Locus tag: plu2588 Name: sapB Funciton: ABC peptide transport permease protein Locus tag: plu2589 Name: sapC Funciton: ABC peptide transport permease protein Locus tag: plu2590 Name: sapD Funciton: ABC peptide transport ATPase protein Locus tag: plu2591 Name: sapF Funciton: ABC peptide transport ATPase protein
	plu2587	sapA	ABC peptide transport periplasmic protein
	plu2588	sapB	ABC peptide transport permease protein
	plu2589	sapC	ABC peptide transport permease protein
	plu2590	sapD	ABC peptide transport ATPase protein
	plu2591	sapF	ABC peptide transport ATPase protein
Position: -88 Score: 4.5 Sequence: GTAAAAAATTATCATTTTC Locus tag: plu4446 Name: fecA Funciton: Iron(III) dicitrate outer membrane transporter precursor protein FecA Locus tag: plu4447 Name: fecB Funciton: iron(III) dicitrate-binding periplasmic protein Locus tag: plu4448 Name: fecC Funciton: Iron(III) dicitrate transport system permease protein FecC Locus tag: plu4449 Name: fecD Funciton: Iron(III) dicitrate transport system permease protein FecD Locus tag: plu4450 Name: fecE Funciton: Iron(III) dicitrate transport ATP-binding protein FecE
	plu4446	fecA	Iron(III) dicitrate outer membrane transporter precursor protein FecA
	plu4447	fecB	iron(III) dicitrate-binding periplasmic protein
	plu4448	fecC	Iron(III) dicitrate transport system permease protein FecC
	plu4449	fecD	Iron(III) dicitrate transport system permease protein FecD
	plu4450	fecE	Iron(III) dicitrate transport ATP-binding protein FecE
Position: -64 Score: 4.5 Sequence: TGTAATGATAACTATTCTC Locus tag: plu4444 Name: fecI Funciton: ECF-family RNA polymerase sigma factor fecI Locus tag: plu4445 Name: fecR Funciton: transmembrane signal transducer for ferric citrate transport
	plu4444	fecI	ECF-family RNA polymerase sigma factor fecI
	plu4445	fecR	transmembrane signal transducer for ferric citrate transport
Position: -78 Score: 4.3 Sequence: CATATTGATAAGTATTCTC Position: -72 Score: 4 Sequence: GATAAGTATTCTCATTTGT Locus tag: plu2853 Name: yiuA Funciton: siderophore ABC transporter, substrate binding periplasmic protein Locus tag: plu2852 Name: yiuB Funciton: ferric-enterobactin ABC-transporter, permease component Locus tag: plu2851 Name: yiuC Funciton: ferric-enterobactin ABC transporter ATP-binding protein Locus tag: plu2850 Name: null Funciton: Outer membrane receptor for ferrienterochelin
	plu2853	yiuA	siderophore ABC transporter, substrate binding periplasmic protein
	plu2852	yiuB	ferric-enterobactin ABC-transporter, permease component
	plu2851	yiuC	ferric-enterobactin ABC transporter ATP-binding protein
	plu2850		Outer membrane receptor for ferrienterochelin
Position: -244 Score: 4 Sequence: AATGTTGGTTATTATTCTC Position: -238 Score: 4.2 Sequence: GGTTATTATTCTCATTTGC Locus tag: plu0209 Name: feoA Funciton: ferrous iron transport protein A Locus tag: plu0208 Name: feoB Funciton: ferrous iron transport protein B Locus tag: plu0207 Name: null Funciton: ferrous iron transport protein C
	plu0209	feoA	ferrous iron transport protein A
	plu0208	feoB	ferrous iron transport protein B
	plu0207		ferrous iron transport protein C
Position: -92 Score: 5.2 Sequence: GATATTGGTAATCATTATC Position: -86 Score: 4.7 Sequence: GGTAATCATTATCATTTGT Locus tag: plu4253 Name: yjjZ Funciton: putative membrane protein
	plu4253	yjjZ	putative membrane protein
Position: -87 Score: 4.4 Sequence: GATAAAGGTTATCATTACC Position: -81 Score: 4.3 Sequence: GGTTATCATTACCATTATA Locus tag: plu2622 Name: sufA Funciton: scaffold protein for iron-sulfur cluster assembly Locus tag: plu2621 Name: sufB Funciton: FeS assembly protein Locus tag: plu2620 Name: sufC Funciton: FeS assembly ATPase Locus tag: plu2619 Name: sufD Funciton: FeS assembly protein Locus tag: plu2618 Name: sufS Funciton: Selenocysteine lyase Locus tag: plu2617 Name: sufE Funciton: cysteine desulfuration protein
	plu2622	sufA	scaffold protein for iron-sulfur cluster assembly
	plu2621	sufB	FeS assembly protein
	plu2620	sufC	FeS assembly ATPase
	plu2619	sufD	FeS assembly protein
	plu2618	sufS	Selenocysteine lyase
	plu2617	sufE	cysteine desulfuration protein
Position: -100 Score: 4.3 Sequence: GACAATGATAATAATAATA Position: -94 Score: 5.3 Sequence: GATAATAATAATAATTATC Position: -88 Score: 4.9 Sequence: AATAATAATTATCATAATT Position: -82 Score: 4.1 Sequence: AATTATCATAATTATATTT Locus tag: plu4627 Name: fhuF Funciton: ferric iron reductase involved in ferric hydroximate transport
	plu4627	fhuF	ferric iron reductase involved in ferric hydroximate transport
Position: -49 Score: 5.2 Sequence: GATATTGATAATCGTTATC Position: -43 Score: 4.5 Sequence: GATAATCGTTATCATATAC Locus tag: plu2672 Name: sitA Funciton: iron ABC transporter, periplasmic substrate-binding protein Locus tag: plu2673 Name: sitB Funciton: ATP-binding protein for iron and manganese ABC transporter Locus tag: plu2674 Name: sitC Funciton: iron ABC transporter, membrane protein Locus tag: plu2675 Name: sitD Funciton: iron ABC transporter, membrane protein
	plu2672	sitA	iron ABC transporter, periplasmic substrate-binding protein
	plu2673	sitB	ATP-binding protein for iron and manganese ABC transporter
	plu2674	sitC	iron ABC transporter, membrane protein
	plu2675	sitD	iron ABC transporter, membrane protein
Position: -54 Score: 4.7 Sequence: TATAACGATAATAATTCTC Position: -48 Score: 4.6 Sequence: GATAATAATTCTCACTATG Locus tag: plu2631 Name: hemP Funciton: hemin uptake protein Locus tag: plu2632 Name: hemR Funciton: TonB-dependent outer membrane hemin receptor Locus tag: plu2633 Name: hemS Funciton: hemin transport protein Locus tag: plu2634 Name: hemT Funciton: hemin ABC transporter, substrate-binding protein Locus tag: plu2635 Name: hemU Funciton: hemin transport ABC permease protein Locus tag: plu2636 Name: hemV Funciton: hemin transport system ATP-binding protein
	plu2631	hemP	hemin uptake protein
	plu2632	hemR	TonB-dependent outer membrane hemin receptor
	plu2633	hemS	hemin transport protein
	plu2634	hemT	hemin ABC transporter, substrate-binding protein
	plu2635	hemU	hemin transport ABC permease protein
	plu2636	hemV	hemin transport system ATP-binding protein
Position: -59 Score: 4.4 Sequence: TGAAATGAGACTCATTATT Position: -53 Score: 3.6 Sequence: GAgAcTcATtATtATTtaa Locus tag: plu4729 Name: bfd Funciton: bacterioferritin-associated ferredoxin Locus tag: plu4728 Name: bfr Funciton: bacterioferrin
	plu4729	bfd	bacterioferritin-associated ferredoxin
	plu4728	bfr	bacterioferrin
Position: -97 Score: 5 Sequence: TTTAATGATAATAATTATC Position: -91 Score: 5.5 Sequence: GATAATAATTATCATTTTC Locus tag: plu2040 Name: viuB Funciton: FAD-binding 9 siderophore-interacting domain protein
	plu2040	viuB	FAD-binding 9 siderophore-interacting domain protein
Position: -45 Score: 4.5 Sequence: GTAAACGATTCTTATTATC Locus tag: plu2718 Name: cjrA Funciton: putative lipoprotein of unknown function DUF399
	plu2718	cjrA	putative lipoprotein of unknown function DUF399
Position: -102 Score: 4.3 Sequence: GGTATTGATAAGCATTTCC Locus tag: plu0075 Name: sodA Funciton: manganese/iron superoxide dismutase
	plu0075	sodA	manganese/iron superoxide dismutase
Position: -73 Score: 4.7 Sequence: AAAAATAATTTTCATTAGC Position: -56 Score: 4 Sequence: GCATATGAAATTAATTATC Position: -50 Score: 4.5 Sequence: GAAATTAATTATCATTACT Locus tag: plu2717 Name: cjrB Funciton: TonB family protein
	plu2717	cjrB	TonB family protein
Position: -147 Score: 4.4 Sequence: TTAAATGAGATTCATTTTC Position: -141 Score: 4.4 Sequence: GAGATTCATTTTCATTTTT Locus tag: plu2689 Name: ftnA Funciton: ferritin
	plu2689	ftnA	ferritin
Position: -125 Score: 4.7 Sequence: ATAATTGATAATTATTATC Position: -119 Score: 4.9 Sequence: GATAATTATTATCATTTAT Locus tag: plu2637 Name: null Funciton: putative membrane protein
	plu2637		putative membrane protein
Position: -98 Score: 5.1 Sequence: AATAATGATAATTACTATC Locus tag: plu3941 Name: exbB Funciton: TonB-dependent siderophore transporter component ExbB Locus tag: plu3940 Name: exbD Funciton: TonB-dependent siderophore transporter component ExbD
	plu3941	exbB	TonB-dependent siderophore transporter component ExbB
	plu3940	exbD	TonB-dependent siderophore transporter component ExbD
Position: -160 Score: 5.1 Sequence: ATTAATGAGAATCATTATC Position: -154 Score: 4.6 Sequence: GAGAATCATTATCAATAGT Locus tag: plu2316 Name: FuyA Funciton: TonB-dependent receptor Locus tag: plu2317 Name: YbtX Funciton: MFS-family transporter Locus tag: plu2318 Name: nrpA Funciton: siderophore ABC transporter, ATP-binding/permease protein Locus tag: plu2319 Name: nrpA Funciton: siderophore ABC transporter, ATP-binding/permease protein Locus tag: plu2320 Name: irp2 Funciton: non-ribosomal peptide synthase (siderophore synthase) Locus tag: plu2321 Name: nrpS Funciton: non-ribosomal peptide synthase (siderophore synthase) Locus tag: plu2322 Name: nrpU Funciton: thiazolinyl-S-HMWP1 reductase, siderophore synthesis Locus tag: plu2323 Name: nrpT Funciton: siderophore biosynthetic protein (thioesterase) Locus tag: plu2324 Name: ybtE Funciton: salicyl-AMP ligase
	plu2316	FuyA	TonB-dependent receptor
	plu2317	YbtX	MFS-family transporter
	plu2318	nrpA	siderophore ABC transporter, ATP-binding/permease protein
	plu2319	nrpA	siderophore ABC transporter, ATP-binding/permease protein
	plu2320	irp2	non-ribosomal peptide synthase (siderophore synthase)
	plu2321	nrpS	non-ribosomal peptide synthase (siderophore synthase)
	plu2322	nrpU	thiazolinyl-S-HMWP1 reductase, siderophore synthesis
	plu2323	nrpT	siderophore biosynthetic protein (thioesterase)
	plu2324	ybtE	salicyl-AMP ligase
Position: -39 Score: 4.3 Sequence: AAAAGTGATAATGATTTGC Position: -33 Score: 4.7 Sequence: GATAATGATTTGCATTTAC Locus tag: plu0741 Name: plu0741 Funciton: RNA polymerase, sigma-24 subunit, ECF subfamily Locus tag: plu0740 Name: plu0740 Funciton: Fe(2+)-dicitrate sensor, transmembrane component
	plu0741	plu0741	RNA polymerase, sigma-24 subunit, ECF subfamily
	plu0740	plu0740	Fe(2+)-dicitrate sensor, transmembrane component
Position: -88 Score: 4.6 Sequence: AATAAAAATAATCATTTTT Locus tag: plu0739 Name: null Funciton: TonB-dependent heme/hemoglobin receptor
	plu0739		TonB-dependent heme/hemoglobin receptor
Position: -196 Score: 4.6 Sequence: GTTAATGATAATAATTTGT Position: -190 Score: 4.2 Sequence: GATAATAATTTGTATTAAT Locus tag: plu4621 Name: null Funciton: null Locus tag: plu4622 Name: fhuE Funciton: ferric ion outer-membrane receptor precursor Locus tag: plu4623 Name: fepB Funciton: ferric enterobactin ABC transporter, periplasmic protein Locus tag: plu4624 Name: fepD Funciton: ferric enterobactin ABC transporter, permease protein Locus tag: plu4625 Name: fepG Funciton: ferric enterobactin ABC transporter, permease protein Locus tag: plu4626 Name: fepC Funciton: ferric enterobactin ABC transporter, ATPase protein
	plu4621		null
	plu4622	fhuE	ferric ion outer-membrane receptor precursor
	plu4623	fepB	ferric enterobactin ABC transporter, periplasmic protein
	plu4624	fepD	ferric enterobactin ABC transporter, permease protein
	plu4625	fepG	ferric enterobactin ABC transporter, permease protein
	plu4626	fepC	ferric enterobactin ABC transporter, ATPase protein
Position: -42 Score: 4.1 Sequence: AATAATAGTAATTGTTCTT Position: -36 Score: 4.1 Sequence: AGTAATTGTTCTTATTATT Locus tag: plu4257 Name: null Funciton: putative enterochelin esterase
	plu4257		putative enterochelin esterase
Position: -131 Score: 4.7 Sequence: TTTTATGATAATGATTATC Position: -125 Score: 4.9 Sequence: GATAATGATTATCATTTCA Locus tag: plu3515 Name: null Funciton: null
	plu3515		null

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Photorhabdus luminescens subsp. laumondii TTO1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --