Regulog DVU3111 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:
Biological process:	Alkaline stress response
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - CRP
By pathway - Alkaline stress response

Statistics of regulated genes
Genome	Genes	Operons
Desulfovibrio vulgaris Hildenborough	4	3
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU3111	* Desulfovibrio vulgaris Hildenborough Site: position = -122 score = 5.18207 sequence = CCGTGCTGGGCATGACTG Gene: DVU3111: transcriptional regulator, Crp/Fnr family	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	transcriptional regulator, Crp/Fnr family

CRON 2.
DVU3110	* Desulfovibrio vulgaris Hildenborough Site: position = -74 score = 5.03976 sequence = CTGTAGCCCAGGCTACGG Gene: DVU3110: L-aspartate oxidase, putative	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	L-aspartate oxidase, putative
DVU3109	Desulfovibrio vulgaris Hildenborough Gene: DVU3109: 4Fe-4S ferredoxin, iron-sulfur binding	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	4Fe-4S ferredoxin, iron-sulfur binding

CRON 3.
nhaC-2	* Desulfovibrio vulgaris Hildenborough Site: position = -101 score = 5.75129 sequence = CCGTGATGCCCGCCACGG Gene: DVU3108: Na+/H+ antiporter NhaC	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	Na+/H+ antiporter NhaC

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU3111 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --