Regulog GalR - Thermotogales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galactosides utilization
Effector:	Galactose
Phylum:	Thermotogae
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - LacI
By effector - Galactose
By pathway - Galactosides utilization

Statistics of regulated genes
Genome	Genes	Operons
Thermotoga maritima MSB8	15	2
Thermotoga sp. RQ2	15	2
Thermotoga neapolitana DSM 4359	19	1
Thermotoga petrophila RKU-1	11	2
Thermotoga naphthophila RKU-10	6	2
Thermotoga lettingae TMO	13	3
Thermosipho africanus TCF52B	8	1
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1	8	2
Petrotoga mobilis SJ95	7	1
Thermotogales bacterium TBF 19.5.1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ganE	* Thermotoga maritima MSB8 Site: position = -51 score = 5.58738 sequence = ACGGTAACGTTTACGT Gene: TM1204: Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein	* Thermotoga sp. RQ2 Site: position = -51 score = 5.58738 sequence = ACGGTAACGTTTACGT Gene: TRQ2_1614: Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein	* Thermotoga neapolitana DSM 4359 Site: position = -62 score = 5.58738 sequence = ACGGTAACGTTTACGT Gene: CTN_1367: Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein	* Thermotoga petrophila RKU-1 Site: position = -75 score = 5.58738 sequence = ACGGTAACGTTTACGT Gene: Tpet_1552: Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein	Thermotoga naphthophila RKU-10	* Thermotoga lettingae TMO Site: position = -32 score = 5.14045 sequence = ATGGTAACGTTTACGA Gene: Tlet_0910: Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein
ganF	Thermotoga maritima MSB8 Gene: TM1203: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga sp. RQ2 Gene: TRQ2_1615: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga neapolitana DSM 4359 Gene: CTN_1368: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga petrophila RKU-1 Gene: Tpet_1553: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO Gene: Tlet_0911: Galactose oligosaccharide ABC transporter, permease protein	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Galactose oligosaccharide ABC transporter, permease protein
ganG	Thermotoga maritima MSB8 Gene: TM1202: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga sp. RQ2 Gene: TRQ2_1616: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga neapolitana DSM 4359 Gene: CTN_1369: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga petrophila RKU-1 Gene: Tpet_1554: Galactose oligosaccharide ABC transporter, permease protein	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO Gene: Tlet_0912: Galactose oligosaccharide ABC transporter, permease protein	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Galactose oligosaccharide ABC transporter, permease protein
ganA	Thermotoga maritima MSB8 Gene: TM1201: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)	Thermotoga sp. RQ2 Gene: TRQ2_1617: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)	Thermotoga neapolitana DSM 4359 Gene: CTN_1370: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)	Thermotoga petrophila RKU-1 Gene: Tpet_1555: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO Gene: Tlet_0913: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
galR	Thermotoga maritima MSB8 Gene: TM1200: Predicted regulator of galactoside utilization, LacI family	Thermotoga sp. RQ2 Gene: TRQ2_1618: Predicted regulator of galactoside utilization, LacI family	Thermotoga neapolitana DSM 4359 Gene: CTN_1371: Predicted regulator of galactoside utilization, LacI family	Thermotoga petrophila RKU-1 Gene: Tpet_1556: Predicted regulator of galactoside utilization, LacI family	* Thermotoga naphthophila RKU-10 Site: position = -65 score = 5.58738 sequence = ACGGTAACGTTTACGT Gene: Tnap_1576: Predicted regulator of galactoside utilization, LacI family	2 Thermotoga lettingae TMO Gene: Tlet_1130: Predicted regulator of galactoside utilization, LacI family Gene: Tlet_0914: Predicted regulator of galactoside utilization, LacI family	Thermosipho africanus TCF52B Gene: THA_1577: Predicted regulator of galactoside utilization, LacI family	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1 Gene: Fnod_0418: Predicted regulator of galactoside utilization, LacI family	* Petrotoga mobilis SJ95 Site: position = -20 score = 4.65624 sequence = TTGTTACCGTTAACGT Site: position = -14 score = 5.31994 sequence = CCGTTAACGTTAACAT Gene: Pmob_0832: Predicted regulator of galactoside utilization, LacI family	Thermotogales bacterium TBF 19.5.1	Predicted regulator of galactoside utilization, LacI family
galX	Thermotoga maritima MSB8	Thermotoga sp. RQ2	* Thermotoga neapolitana DSM 4359 Site: position = -63 score = 4.98782 sequence = CTGTGAACGTTCACGG Gene: CTN_1372: Predicted galactoside ABC transporter type II, sugar-binding protein	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	* Thermotoga lettingae TMO Site: position = -41 score = 5.44276 sequence = TCGGTAACGTTACCGT Gene: Tlet_1127: Predicted galactoside ABC transporter type II, sugar-binding protein	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	* Fervidobacterium nodosum Rt17-B1 Site: position = -69 score = 4.67045 sequence = TCGGTTACGTTACCGG Gene: Fnod_0626: Predicted galactoside ABC transporter type II, sugar-binding protein	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter type II, sugar-binding protein
galY	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359 Gene: CTN_1373: Predicted galactoside ABC transporter type II, permease protein 1	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO Gene: Tlet_1128: Predicted galactoside ABC transporter type II, permease protein 1	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1 Gene: Fnod_0627: Predicted galactoside ABC transporter type II, permease protein 1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter type II, permease protein 1
galZ	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359 Gene: CTN_1374: Predicted galactoside ABC transporter type II, permease protein 2	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO Gene: Tlet_1129: Predicted galactoside ABC transporter type II, permease protein 2	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1 Gene: Fnod_0628: Predicted galactoside ABC transporter type II, permease protein 2	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter type II, permease protein 2
ltpE	* Thermotoga maritima MSB8 Site: position = -53 score = 5.41007 sequence = ACGTGAACGTTCACGG Gene: TM1199: Predicted galactoside ABC transporter, sugar-binding protein	* Thermotoga sp. RQ2 Site: position = -52 score = 5.41007 sequence = ACGTGAACGTTCACGG Gene: TRQ2_1619: Predicted galactoside ABC transporter, sugar-binding protein	* Thermotoga neapolitana DSM 4359 Site: position = 8 score = 4.93926 sequence = ACATAAACGTTCACGG Gene: CTN_1375: Predicted galactoside ABC transporter, sugar-binding protein	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter, sugar-binding protein
ltpF	Thermotoga maritima MSB8 Gene: TM1198: Predicted galactoside ABC transporter, permease protein 1	Thermotoga sp. RQ2 Gene: TRQ2_1620: Predicted galactoside ABC transporter, permease protein 1	Thermotoga neapolitana DSM 4359 Gene: CTN_1376: Predicted galactoside ABC transporter, permease protein 1	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter, permease protein 1
ltpG	Thermotoga maritima MSB8 Gene: TM1197: Predicted galactoside ABC transporter, permease protein 2	Thermotoga sp. RQ2 Gene: TRQ2_1621: Predicted galactoside ABC transporter, permease protein 2	Thermotoga neapolitana DSM 4359 Gene: CTN_1377: Predicted galactoside ABC transporter, permease protein 2	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter, permease protein 2
ltpK	Thermotoga maritima MSB8 Gene: TM1196: Predicted galactoside ABC transporter, ATP-binding protein 1	Thermotoga sp. RQ2 Gene: TRQ2_1622: Predicted galactoside ABC transporter, ATP-binding protein 1	Thermotoga neapolitana DSM 4359 Gene: CTN_1378: Predicted galactoside ABC transporter, ATP-binding protein 1	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter, ATP-binding protein 1
lacA	Thermotoga maritima MSB8 Gene: TM1195: Beta-galactosidase (EC 3.2.1.23), LacA family	Thermotoga sp. RQ2 Gene: TRQ2_1623: Beta-galactosidase (EC 3.2.1.23), LacA family	Thermotoga neapolitana DSM 4359 Gene: CTN_1379: Beta-galactosidase (EC 3.2.1.23), LacA family	* Thermotoga petrophila RKU-1 Site: position = -28 score = 5.25846 sequence = CCGTGAACGTTCACGA Gene: Tpet_1557: Beta-galactosidase (EC 3.2.1.23), LacA family	* Thermotoga naphthophila RKU-10 Site: position = -28 score = 5.25846 sequence = CCGTGAACGTTCACGA Gene: Tnap_1577: Beta-galactosidase (EC 3.2.1.23), LacA family	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	* Fervidobacterium nodosum Rt17-B1 Site: position = -43 score = 5.02051 sequence = CCGGTAACGTTACCAA Gene: Fnod_0419: Beta-galactosidase (EC 3.2.1.23), LacA family	Petrotoga mobilis SJ95 Gene: Pmob_0829: Beta-galactosidase (EC 3.2.1.23), LacA family	Thermotogales bacterium TBF 19.5.1	Beta-galactosidase (EC 3.2.1.23), LacA family
ltpL	Thermotoga maritima MSB8 Gene: TM1194: Predicted galactoside ABC transporter, ATP-binding protein 2	Thermotoga sp. RQ2 Gene: TRQ2_1624: Predicted galactoside ABC transporter, ATP-binding protein 2	Thermotoga neapolitana DSM 4359 Gene: CTN_1380: Predicted galactoside ABC transporter, ATP-binding protein 2	Thermotoga petrophila RKU-1 Gene: Tpet_1558: Predicted galactoside ABC transporter, ATP-binding protein 2	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted galactoside ABC transporter, ATP-binding protein 2
lacZ	Thermotoga maritima MSB8 Gene: TM1193: Beta-galactosidase (EC 3.2.1.23), LacZ family	Thermotoga sp. RQ2 Gene: TRQ2_1625: Beta-galactosidase (EC 3.2.1.23), LacZ family	2 Thermotoga neapolitana DSM 4359 Gene: CTN_1382: Beta-galactosidase (EC 3.2.1.23), LacZ family Gene: CTN_1381: Beta-galactosidase (EC 3.2.1.23), LacZ family	Thermotoga petrophila RKU-1 Gene: Tpet_1559: Beta-galactosidase (EC 3.2.1.23), LacZ family	Thermotoga naphthophila RKU-10 Gene: Tnap_1578: Beta-galactosidase (EC 3.2.1.23), LacZ family	Thermotoga lettingae TMO Gene: Tlet_0915: Beta-galactosidase (EC 3.2.1.23), LacZ family	Thermosipho africanus TCF52B Gene: THA_1578: Beta-galactosidase (EC 3.2.1.23), LacZ family	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Beta-galactosidase (EC 3.2.1.23), LacZ family
galA	Thermotoga maritima MSB8 Gene: TM1192: Alpha-galactosidase (EC 3.2.1.22)	Thermotoga sp. RQ2 Gene: TRQ2_1626: Alpha-galactosidase (EC 3.2.1.22)	Thermotoga neapolitana DSM 4359 Gene: CTN_1383: Alpha-galactosidase (EC 3.2.1.22)	Thermotoga petrophila RKU-1 Gene: Tpet_1560: Alpha-galactosidase (EC 3.2.1.22)	Thermotoga naphthophila RKU-10 Gene: Tnap_1579: Alpha-galactosidase (EC 3.2.1.22)	Thermotoga lettingae TMO Gene: Tlet_1443: Alpha-galactosidase (EC 3.2.1.22)	Thermosipho africanus TCF52B Gene: THA_1053: Alpha-galactosidase (EC 3.2.1.22)	Thermosipho melanesiensis BI429 Gene: Tmel_0423: Alpha-galactosidase (EC 3.2.1.22)	Fervidobacterium nodosum Rt17-B1 Gene: Fnod_0417: Alpha-galactosidase (EC 3.2.1.22)	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Alpha-galactosidase (EC 3.2.1.22)
galT	Thermotoga maritima MSB8 Gene: TM1191: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermotoga sp. RQ2 Gene: TRQ2_1627: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermotoga neapolitana DSM 4359 Gene: CTN_1384: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermotoga petrophila RKU-1 Gene: Tpet_1561: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermotoga naphthophila RKU-10 Gene: Tnap_1580: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermotoga lettingae TMO Gene: Tlet_1103: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermosipho africanus TCF52B Gene: THA_1580: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermosipho melanesiensis BI429 Gene: Tmel_0424: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Fervidobacterium nodosum Rt17-B1 Gene: Fnod_0416: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Petrotoga mobilis SJ95 Gene: Pmob_0831: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Thermotogales bacterium TBF 19.5.1 Gene: Kole_0949: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
galK	Thermotoga maritima MSB8 Gene: TM1190: Galactokinase (EC 2.7.1.6)	Thermotoga sp. RQ2 Gene: TRQ2_1628: Galactokinase (EC 2.7.1.6)	Thermotoga neapolitana DSM 4359 Gene: CTN_1385: Galactokinase (EC 2.7.1.6)	Thermotoga petrophila RKU-1 Gene: Tpet_1562: Galactokinase (EC 2.7.1.6)	Thermotoga naphthophila RKU-10 Gene: Tnap_1581: Galactokinase (EC 2.7.1.6)	Thermotoga lettingae TMO Gene: Tlet_1104: Galactokinase (EC 2.7.1.6)	Thermosipho africanus TCF52B Gene: THA_1581: Galactokinase (EC 2.7.1.6)	Thermosipho melanesiensis BI429 Gene: Tmel_0425: Galactokinase (EC 2.7.1.6)	Fervidobacterium nodosum Rt17-B1 Gene: Fnod_0415: Galactokinase (EC 2.7.1.6)	Petrotoga mobilis SJ95 Gene: Pmob_0830: Galactokinase (EC 2.7.1.6)	Thermotogales bacterium TBF 19.5.1 Gene: Kole_0950: Galactokinase (EC 2.7.1.6)	Galactokinase (EC 2.7.1.6)
lacE	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	* Thermosipho africanus TCF52B Site: position = -60 score = 4.82333 sequence = TCGGTAACATTACCGG Gene: THA_1574: Predicted lactose ABC transporter, substrate binding protein	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0828: Predicted lactose ABC transporter, substrate binding protein	Thermotogales bacterium TBF 19.5.1	Predicted lactose ABC transporter, substrate binding protein
lacF	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B Gene: THA_1575: Predicted lactose ABC transporter, permease protein 1	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0827: Predicted lactose ABC transporter, permease protein 1	Thermotogales bacterium TBF 19.5.1	Predicted lactose ABC transporter, permease protein 1
lacG	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B Gene: THA_1576: Predicted lactose ABC transporter, permease protein 2	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0826: Predicted lactose ABC transporter, permease protein 2	Thermotogales bacterium TBF 19.5.1	Predicted lactose ABC transporter, permease protein 2
THA_1579	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B Gene: THA_1579: alpha-galactosidase, putative	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	alpha-galactosidase, putative
Tlet_1102	Thermotoga maritima MSB8	Thermotoga sp. RQ2	Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1	Thermotoga naphthophila RKU-10	* Thermotoga lettingae TMO Site: position = -2 score = 5.25548 sequence = TCGTGAACGTTTACGA Gene: Tlet_1102: hypothetical protein	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog GalR - Thermotogales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --