Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog TreR - Staphylococcaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Trehalose utilization
Effector: Trehalose-6-phosphate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 3 1
Staphylococcus capitis SK14
Staphylococcus epidermidis ATCC 12228
Staphylococcus carnosus subsp. carnosus TM300 4 1
Staphylococcus haemolyticus JCSC1435 3 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 3 1
Macrococcus caseolyticus JCSC5402 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
treP
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -54
score = 7.01828
sequence = ATAACTTGTCTAGACAAGTTAT

Gene: SA0432: phosphotransferase system trehalose-specific enzyme IIBC component homolog
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
*2
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0109: phosphotransferase system trehalose-specific enzyme IIBC component homolog

Site:
position = -57
score = 5.92347
sequence = ATAACTTGTCTAGACAAGTACA

Gene: Sca_0108: phosphotransferase system trehalose-specific enzyme IIBC component homolog
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -55
score = 6.54258
sequence = AAAACTTGTCTAGACAAGTTAT

Gene: SH2538: phosphotransferase system trehalose-specific enzyme IIBC component homolog
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -67
score = 6.76146
sequence = AAAACTTGTATAGACAAGTTAT

Gene: SSP2282: phosphotransferase system trehalose-specific enzyme IIBC component homolog
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1938: phosphotransferase system trehalose-specific enzyme IIBC component homolog
phosphotransferase system trehalose-specific enzyme IIBC component homolog
treA
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0433: trehalose-6-phosphate hydrolase
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0110: trehalose-6-phosphate hydrolase
 
Staphylococcus haemolyticus JCSC1435

Gene: SH2537: trehalose-6-phosphate hydrolase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP2281: trehalose-6-phosphate hydrolase
*
Macrococcus caseolyticus JCSC5402

Site:
position = -65
score = 5.69433
sequence = ACAACTTGTAAATACATGTTGT

Gene: MCCL_1937: trehalose-6-phosphate hydrolase
trehalose-6-phosphate hydrolase
treR
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0434: trehalose-6-phosphate-responsive transcriptional regulator
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0111: trehalose-6-phosphate-responsive transcriptional regulator
 
Staphylococcus haemolyticus JCSC1435

Gene: SH2536: trehalose-6-phosphate-responsive transcriptional regulator
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP2280: trehalose-6-phosphate-responsive transcriptional regulator
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1936: trehalose-6-phosphate-responsive transcriptional regulator
trehalose-6-phosphate-responsive transcriptional regulator
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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