Regulog Rex - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 33 | 17 |
| Staphylococcus capitis SK14 | 24 | 10 |
| Staphylococcus epidermidis ATCC 12228 | 27 | 12 |
| Staphylococcus carnosus subsp. carnosus TM300 | 14 | 7 |
| Staphylococcus haemolyticus JCSC1435 | 22 | 11 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 7 | 6 |
| Macrococcus caseolyticus JCSC5402 | 17 | 5 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| vicR |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -79 score = 4.88934 sequence = CTGTGATTTTTTACACAA Gene: SA0017: cell wall homeostasis regulation two-component system, response regulator |
Gene: STACA0001_1355: cell wall homeostasis regulation two-component system, response regulator |
Gene: SE0018: cell wall homeostasis regulation two-component system, response regulator |
Gene: Sca_2456: cell wall homeostasis regulation two-component system, response regulator |
Gene: SH0017: cell wall homeostasis regulation two-component system, response regulator |
Gene: SSP0021: cell wall homeostasis regulation two-component system, response regulator |
Gene: MCCL_0021: cell wall homeostasis regulation two-component system, response regulator |
cell wall homeostasis regulation two-component system, response regulator |
| vicK |
Gene: SA0018: cell wall homeostasis regulation two-component system, sensor kinase |
Gene: STACA0001_1354: cell wall homeostasis regulation two-component system, sensor kinase |
Gene: SE0019: cell wall homeostasis regulation two-component system, sensor kinase |
Gene: Sca_2455: cell wall homeostasis regulation two-component system, sensor kinase |
Gene: SH0018: cell wall homeostasis regulation two-component system, sensor kinase |
Gene: SSP0022: cell wall homeostasis regulation two-component system, sensor kinase |
Gene: MCCL_0022: cell wall homeostasis regulation two-component system, sensor kinase |
cell wall homeostasis regulation two-component system, sensor kinase |
| CRON 2. | ||||||||
| srrA |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -103 score = 5.63499 sequence = TTGAGAATTTTTTCACAA Gene: SA1323: Staphylococcal respiratory response protein SrrA |
*
Staphylococcus capitis SK14 Site: position = -106 score = 5.22335 sequence = TTGAGATTTTTTTCACAT Gene: STACA0001_1733: Staphylococcal respiratory response protein SrrA |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -104 score = 4.9433 sequence = TTGATATTTTTTTCACAA Gene: SE1176: Staphylococcal respiratory response protein SrrA |
Gene: Sca_1118: Staphylococcal respiratory response protein SrrA |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -101 score = 4.77667 sequence = TTGCTATTTTTTTCACAA Gene: SH1424: Staphylococcal respiratory response protein SrrA |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -105 score = 5.09306 sequence = ATGATAATTTTTTCACAA Gene: SSP1260: Staphylococcal respiratory response protein SrrA |
Gene: MCCL_1138: Staphylococcal respiratory response protein SrrA |
Staphylococcal respiratory response protein SrrA |
| srrB |
Gene: SA1322: Staphylococcal respiratory response protein SrrB |
Gene: STACA0001_1732: Staphylococcal respiratory response protein SrrB |
Gene: SE1175: Staphylococcal respiratory response protein SrrB |
Gene: Sca_1117: Staphylococcal respiratory response protein SrrB |
Gene: SH1425: Staphylococcal respiratory response protein SrrB |
Gene: SSP1261: Staphylococcal respiratory response protein SrrB |
Gene: MCCL_1137: Staphylococcal respiratory response protein SrrB |
Staphylococcal respiratory response protein SrrB |
| CRON 3. | ||||||||
| SA2268 |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -129 score = 5.7486 sequence = TTGTGAAATACATCACAA Gene: SA2268: conserved hypothetical protein |
*
Staphylococcus capitis SK14 Site: position = -94 score = 5.68161 sequence = TTGTGAAAAGTATCACAA Gene: STACA0001_1015: conserved hypothetical protein |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -91 score = 5.68161 sequence = TTGTGAAATGTATCACAA Gene: SE2038: conserved hypothetical protein |
|
*
Staphylococcus haemolyticus JCSC1435 Site: position = -87 score = 5.68161 sequence = TTGTGAAAAGTATCACAA Gene: SH0583: conserved hypothetical protein |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -107 score = 6.1004 sequence = TTGTGAAATTAATCACAA Gene: SSP0417: conserved hypothetical protein |
|
conserved hypothetical protein |
| CRON 4. | ||||||||
| pflB |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -96 score = 6.01941 sequence = ATGTGAAAAAAATCACAA Gene: SA0218: Pyruvate formate-lyase (EC 2.3.1.54) |
|
*
Staphylococcus epidermidis ATCC 12228 Site: position = -74 score = 5.83851 sequence = ATGTGAAATTAATCACAT Gene: SE0214: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -93 score = 5.28459 sequence = AAGTGATTTTTTTCACAA Gene: Sca_2017: Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
*
Macrococcus caseolyticus JCSC5402 Site: position = -74 score = 4.71535 sequence = TTGTGATACTTTTCACGT Gene: MCCL_0434: Pyruvate formate-lyase (EC 2.3.1.54) |
Pyruvate formate-lyase (EC 2.3.1.54) |
| pflA |
Gene: SA0219: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
Gene: SE0215: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sca_2016: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
|
Gene: MCCL_0433: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| CRON 5. | ||||||||
| nirR |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -64 score = 5.3317 sequence = ATGTGATTCTTTTCACAA Gene: SA2189: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
*
Staphylococcus capitis SK14 Site: position = -64 score = 5.96315 sequence = ATGTGAATAAAATCACAA Gene: STACA0001_1076: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
Gene: SE1979: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -64 score = 5.69577 sequence = TTGTGAATACATTCACAT Gene: Sca_1899: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
Gene: SH0650: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
|
*
Macrococcus caseolyticus JCSC5402 Site: position = -91 score = 5.77136 sequence = ATGTGAACATATTCACAA Gene: MCCL_1342: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
| sirA |
|
|
|
Gene: Sca_1898: syroheme synthase |
|
|
Gene: MCCL_1341: syroheme synthase |
syroheme synthase |
| nasD |
Gene: SA2188: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
Gene: STACA0001_1077: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -145 score = 5.59201 sequence = ATGTGAATTACATCACAA Gene: SE1978: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
Gene: Sca_1897: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -141 score = 5.5677 sequence = TTGTGAAAATCATCACAT Gene: SH0651: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
|
Gene: MCCL_1340: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) |
| nasE |
Gene: SA2187: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
Gene: STACA0001_1078: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
Gene: SE1977: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
Gene: Sca_1896: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
Gene: SH0652: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
|
Gene: MCCL_1339: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) |
| nasF |
Gene: SA2186: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: STACA0001_1079: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: SE1976: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: Sca_1895: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: SH0653: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Gene: MCCL_1338: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
| CRON 6. | ||||||||
| nirC |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -72 score = 6.23263 sequence = TTGTGAAATTATTCACAA Gene: SA0293: Formate/nitrite family of transporters |
|
|
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -75 score = 5.90045 sequence = TTGTGAAAGTATTCACAA Gene: Sca_1814: Formate/nitrite family of transporters |
|
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -71 score = 6.23263 sequence = TTGTGAAAATATTCACAA Gene: SSP0590: Formate/nitrite family of transporters |
|
Formate/nitrite family of transporters |
| CRON 7. | ||||||||
| narK |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -168 score = 4.61555 sequence = ATGTTCACTTTTTCACAA Gene: SA2176: nitrate-nitrite antiporter |
*
Staphylococcus capitis SK14 Site: position = -156 score = 4.92023 sequence = ATGTTCATTTTTTCACAA Gene: STACA0001_1087: nitrate-nitrite antiporter |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -149 score = 4.92023 sequence = ATGTTCATATTTTCACAA Gene: SE1968: nitrate-nitrite antiporter |
Gene: Sca_1887: nitrate-nitrite antiporter |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -125 score = 4.92023 sequence = ATGTTCATTTTTTCACAA Gene: SH0661: nitrate-nitrite antiporter |
|
*
Macrococcus caseolyticus JCSC5402 Site: position = -73 score = 5.06421 sequence = ATGTTAAACTTATCACAA Gene: MCCL_0144: nitrate-nitrite antiporter |
nitrate-nitrite antiporter |
| CRON 8. | ||||||||
| narG |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -107 score = 5.54698 sequence = TTGTGAAAAAATGTACAA Gene: SA2185: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Staphylococcus capitis SK14 Site: position = -89 score = 5.54698 sequence = TTGTGAAAAAATGTACAA Gene: STACA0001_1080: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -86 score = 5.54698 sequence = TTGTGAAAAAATGTACAA Gene: SE1975: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
Gene: Sca_1894: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -91 score = 5.3469 sequence = ATGTGAAAAATTGTACAA Gene: SH0654: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
|
*
Macrococcus caseolyticus JCSC5402 Site: position = -58 score = 5.42002 sequence = TTGTGAAAAGTTTCATAA Gene: MCCL_0136: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
| narH |
Gene: SA2184: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: STACA0001_1081: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: SE1974: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: Sca_1893: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: SH0655: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
|
Gene: MCCL_0137: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
| narJ |
Gene: SA2183: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: STACA0001_1082: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: SE1973: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: Sca_1892: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: SH0656: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
|
Gene: MCCL_0138: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
| narI |
Gene: SA2182: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: STACA0001_1083: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: SE1972: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: Sca_1891: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: SH0657: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
|
Gene: MCCL_0139: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
| nreA |
Gene: SA2181: control of nitrate reduction protein NreA |
Gene: STACA0001_1084: control of nitrate reduction protein NreA |
Gene: SE1971: control of nitrate reduction protein NreA |
Gene: Sca_1890: control of nitrate reduction protein NreA |
Gene: SH0658: control of nitrate reduction protein NreA |
|
Gene: MCCL_0140: control of nitrate reduction protein NreA |
control of nitrate reduction protein NreA |
| nreB |
Gene: SA2180: nitrate respiration regulation two-component system, sensor histidine kinase NreB |
Gene: STACA0001_1085: nitrate respiration regulation two-component system, sensor histidine kinase NreB |
Gene: SE1970: nitrate respiration regulation two-component system, sensor histidine kinase NreB |
Gene: Sca_1889: nitrate respiration regulation two-component system, sensor histidine kinase NreB |
Gene: SH0659: nitrate respiration regulation two-component system, sensor histidine kinase NreB |
|
Gene: MCCL_0141: nitrate respiration regulation two-component system, sensor histidine kinase NreB |
nitrate respiration regulation two-component system, sensor histidine kinase NreB |
| nreC |
Gene: SA2179: two-component response regulator NreC |
Gene: STACA0001_1086: two-component response regulator NreC |
Gene: SE1969: two-component response regulator NreC |
Gene: Sca_1888: two-component response regulator NreC |
Gene: SH0660: two-component response regulator NreC |
|
Gene: MCCL_0142: two-component response regulator NreC |
two-component response regulator NreC |
| CRON 9. | ||||||||
| lctP |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -124 score = 5.95817 sequence = TTGTGAAAAAAATCACAT Gene: SA2156: L-lactate permease |
*
Staphylococcus capitis SK14 Site: position = -129 score = 5.88084 sequence = TTGTGAAAAAGTTCACAA Gene: STACA0001_1119: L-lactate permease |
Gene: SE1945: L-lactate permease |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -85 score = 5.93381 sequence = ATGTGAATTAATTCACAT Gene: Sca_1867: L-lactate permease |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -161 score = 5.88084 sequence = TTGTGAAAAAGTTCACAA Gene: SH0691: L-lactate permease |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -76 score = 6.25197 sequence = TTGTGAAAAAATTCACAA Gene: SSP0537: L-lactate permease |
*
Macrococcus caseolyticus JCSC5402 Site: position = -142 score = 6.1004 sequence = TTGTGAAAATAATCACAA Gene: MCCL_0162: L-lactate permease |
L-lactate permease |
| ldh |
*2
Staphylococcus aureus subsp. aureus N315 Gene: SA2395: L-lactate dehydrogenase (EC:1.1.1.27) Site: position = -169 score = 6.01941 sequence = ATGTGAAATAAATCACAA Site: position = -227 score = 6.01941 sequence = ATGTGAAATAAATCACAA Gene: SA0232: L-lactate dehydrogenase (EC:1.1.1.27) |
Gene: STACA0001_0896: L-lactate dehydrogenase (EC:1.1.1.27) |
Gene: SE2145: L-lactate dehydrogenase (EC:1.1.1.27) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -55 score = 5.46402 sequence = ATGTGAAATAAATCATAT Gene: Sca_1369: L-lactate dehydrogenase (EC:1.1.1.27) |
Gene: SH0525: L-lactate dehydrogenase (EC:1.1.1.27) |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -55 score = 6.11974 sequence = TTGTGAAATAAATCACAA Site: position = -113 score = 6.11974 sequence = TTGTGAAATAAATCACAA Gene: SSP1001: L-lactate dehydrogenase (EC:1.1.1.27) |
Gene: MCCL_0163: L-lactate dehydrogenase (EC:1.1.1.27) |
L-lactate dehydrogenase (EC:1.1.1.27) |
| CRON 10. | ||||||||
| hmp |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -363 score = 5.6843 sequence = TTGTGATTTATTTCACAT Gene: SA0231: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: STACA0001_2302: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: SE0440: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: Sca_0683: Nitric oxide dioxygenase (EC 1.14.12.17) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -98 score = 5.69163 sequence = TTGTGAATTTAATTACAA Gene: SH1899: Nitric oxide dioxygenase (EC 1.14.12.17) |
*2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -99 score = 5.94437 sequence = TTGTGAATTTTATCACAA Gene: SSP1728: Nitric oxide dioxygenase (EC 1.14.12.17) Gene: SSP2410: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: MCCL_0684: Nitric oxide dioxygenase (EC 1.14.12.17) |
Nitric oxide dioxygenase (EC 1.14.12.17) |
| CRON 11. | ||||||||
| frp |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -185 score = 6.01998 sequence = TTGTGAAAAATATCACAA Gene: SA2311: NAD(P)H-flavin oxidoreductase |
*
Staphylococcus capitis SK14 Site: position = -197 score = 5.80069 sequence = TTGTGAAAGTTTTCACAA Gene: STACA0001_0985: NAD(P)H-flavin oxidoreductase |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -164 score = 5.33824 sequence = ATGTGATTTAATTCACTA Site: position = -208 score = 4.86375 sequence = TAGTAAAAACATTCACAA Gene: SE2073: NAD(P)H-flavin oxidoreductase |
Gene: Sca_1976: NAD(P)H-flavin oxidoreductase |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -133 score = 5.64879 sequence = TTGTTAAAAAATTCACAT Site: position = -182 score = 6.17636 sequence = TTGTGAATTTATTCACAA Gene: SH0546: NAD(P)H-flavin oxidoreductase |
Gene: SSP0379: NAD(P)H-flavin oxidoreductase |
|
NAD(P)H-flavin oxidoreductase |
| CRON 12. | ||||||||
| ddh |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -39 score = 5.88279 sequence = TTGTGATATTTTTCACAA Gene: SA2312: D-lactate dehydrogenase (EC 1.1.1.28) |
*
Staphylococcus capitis SK14 Site: position = -119 score = 5.81384 sequence = TTGTGAAAACTTTCACAA Gene: STACA0001_0984: D-lactate dehydrogenase (EC 1.1.1.28) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -56 score = 4.88487 sequence = TTGTGAATGTTTTTACTA Site: position = -100 score = 5.46029 sequence = TAGTGAATTAAATCACAT Gene: SE2074: D-lactate dehydrogenase (EC 1.1.1.28) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -81 score = 6.01479 sequence = TTGTGAATATATTCACAT Gene: Sca_2121: D-lactate dehydrogenase (EC 1.1.1.28) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -203 score = 5.48212 sequence = ATGTGAATTTTTTAACAA Site: position = -154 score = 6.1957 sequence = TTGTGAATAAATTCACAA Gene: SH0545: D-lactate dehydrogenase (EC 1.1.1.28) |
|
|
D-lactate dehydrogenase (EC 1.1.1.28) |
| CRON 13. | ||||||||
| arcA |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -79 score = 5.78224 sequence = ATGTGAATATAATCACAT Gene: SA2428: Arginine deiminase (EC 3.5.3.6) |
*
Staphylococcus capitis SK14 Site: position = -77 score = 5.88256 sequence = TTGTGAATATAATCACAT Gene: STACA0001_1845: Arginine deiminase (EC 3.5.3.6) |
*2
Staphylococcus epidermidis ATCC 12228 Site: position = -76 score = 5.49447 sequence = TTGTGAATTAAATCACAC Gene: SE0106: Arginine deiminase (EC 3.5.3.6) Site: position = -76 score = 4.76749 sequence = ATGTGATAATCATCACGA Gene: SE2217: Arginine deiminase (EC 3.5.3.6) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -74 score = 5.53216 sequence = ATGTGATTTTAATCACAT Gene: Sca_2085: Arginine deiminase (EC 3.5.3.6) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -76 score = 5.51948 sequence = ATGTGAAAACAATCACAT Gene: SH0367: Arginine deiminase (EC 3.5.3.6) |
|
|
Arginine deiminase (EC 3.5.3.6) |
| arcB |
Gene: SA2427: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: STACA0001_1844: Ornithine carbamoyltransferase (EC 2.1.3.3) |
2
Staphylococcus epidermidis ATCC 12228 Gene: SE0103: Ornithine carbamoyltransferase (EC 2.1.3.3) Gene: SE2216: Ornithine carbamoyltransferase (EC 2.1.3.3) |
|
|
|
|
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| arcD |
Gene: SA2426: Arginine/ornithine antiporter ArcD |
Gene: STACA0001_1843: Arginine/ornithine antiporter ArcD |
2
Staphylococcus epidermidis ATCC 12228 Gene: SE0105: Arginine/ornithine antiporter ArcD Gene: SE2215: Arginine/ornithine antiporter ArcD |
Gene: Sca_2084: Arginine/ornithine antiporter ArcD |
Gene: SH0368: Arginine/ornithine antiporter ArcD |
|
|
Arginine/ornithine antiporter ArcD |
| arcC |
Gene: SA2425: Carbamate kinase (EC 2.7.2.2) |
Gene: STACA0001_1842: Carbamate kinase (EC 2.7.2.2) |
Gene: SE0102: Carbamate kinase (EC 2.7.2.2) |
|
|
|
|
Carbamate kinase (EC 2.7.2.2) |
| arcR |
Gene: SA2424: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family |
Gene: STACA0001_1841: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family |
2
Staphylococcus epidermidis ATCC 12228 Gene: SE0104: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family Gene: SE2214: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family |
Gene: Sca_2083: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family |
Gene: SH0369: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family |
|
|
Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family |
| CRON 14. | ||||||||
| ald1 |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -38 score = 6.23263 sequence = TTGTGAAATTATTCACAA Gene: SA1272: Alanine dehydrogenase (EC 1.4.1.1) |
|
|
|
|
|
Gene: MCCL_0065: Alanine dehydrogenase (EC 1.4.1.1) |
Alanine dehydrogenase (EC 1.4.1.1) |
| CRON 15. | ||||||||
| adhE |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -39 score = 6.25197 sequence = TTGTGAAATAATTCACAA Gene: SA0143: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
|
*
Staphylococcus epidermidis ATCC 12228 Site: position = -38 score = 6.09594 sequence = TTGTGAATTATTTCACAA Gene: SE0506: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
|
|
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Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
| CRON 16. | ||||||||
| adhB |
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Staphylococcus capitis SK14 Site: position = -36 score = 6.23263 sequence = TTGTGAAAATATTCACAA Gene: STACA0001_0960: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
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Staphylococcus epidermidis ATCC 12228 Site: position = -37 score = 5.38239 sequence = TTGCGAAAAATTTCACAT Gene: SE2098: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
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Staphylococcus haemolyticus JCSC1435 Site: position = -38 score = 6.07106 sequence = TTGTGAAAATATTCACAT Gene: SH0522: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
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Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
| CRON 17. | ||||||||
| adh1/adhB |
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Staphylococcus aureus subsp. aureus N315 Site: position = -306 score = 6.03413 sequence = TTGTGAATTAATTCACAT Gene: SA0562: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
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Gene: SE0375: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
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Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |