Regulog Mce2R - Mycobacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Fatty acid metabolism
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Mycobacteriaceae
By TF family - GntR/Others
By pathway - Fatty acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Mycobacterium abscessus ATCC 19977	2	1
Mycobacterium avium 104
Mycobacterium flavescens PYR-GCK
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium smegmatis str. MC2 155	2	1
Mycobacterium sp. JLS	2	1
Mycobacterium tuberculosis H37Rv	10	1
Mycobacterium vanbaalenii PYR-1	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
mce2R	* Mycobacterium abscessus ATCC 19977 Site: position = -52 score = 5.92146 sequence = TAAATTGGTCAGACCACTAGA Gene: MAB_3018: Putative transcriptional regulator, GntR family	Mycobacterium avium 104	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	* Mycobacterium smegmatis str. MC2 155 Site: position = -52 score = 5.85285 sequence = ACCACTGGTAAGACCACTTGA Gene: MSMEG_3527: Putative transcriptional regulator, GntR family	* Mycobacterium sp. JLS Site: position = -54 score = 6.15593 sequence = CTAACTGGTCAGACCACTTGA Gene: Mjls_2757: Putative transcriptional regulator, GntR family	* Mycobacterium tuberculosis H37Rv Site: position = -52 score = 5.3435 sequence = GGTGTCGGTCTGACCACTTGA Gene: Rv0586: Putative transcriptional regulator, GntR family	* Mycobacterium vanbaalenii PYR-1 Site: position = -54 score = 5.86581 sequence = CACACTGGTCTGACCACTTGA Gene: Mvan_2942: Putative transcriptional regulator, GntR family	Putative transcriptional regulator, GntR family
yrbE2A	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4553: hypothetical protein	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0587: hypothetical protein Rv0587	Mycobacterium vanbaalenii PYR-1	hypothetical protein
yrbE2B	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4552: hypothetical protein Rv0588	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0588: hypothetical protein Rv0588	Mycobacterium vanbaalenii PYR-1	hypothetical protein Rv0588
mce2A	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4551: MCE-family protein Mce2A	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0589: MCE-family protein Mce2A	Mycobacterium vanbaalenii PYR-1	MCE-family protein Mce2A
mce2B	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4550: virulence factor mce family protein	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0590: virulence factor mce family protein	Mycobacterium vanbaalenii PYR-1	virulence factor mce family protein
Rv0590A	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0590A: MCE-FAMILY RELATED PROTEIN	Mycobacterium vanbaalenii PYR-1	MCE-FAMILY RELATED PROTEIN
mce2C	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4549: Virulence factor mce family protein	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0591: Virulence factor mce family protein	Mycobacterium vanbaalenii PYR-1	Virulence factor mce family protein
mce2D	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4548: virulence factor mce family protein	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0592: virulence factor mce family protein	Mycobacterium vanbaalenii PYR-1	virulence factor mce family protein
lprL	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4547: virulence factor Mce family protein	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0593: virulence factor Mce family protein	Mycobacterium vanbaalenii PYR-1	virulence factor Mce family protein
mce2F	Mycobacterium abscessus ATCC 19977	Mycobacterium avium 104 Gene: MAV_4546: virulence factor mce family protein	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155	Mycobacterium sp. JLS	Mycobacterium tuberculosis H37Rv Gene: Rv0594: virulence factor mce family protein	Mycobacterium vanbaalenii PYR-1	virulence factor mce family protein
fah	Mycobacterium abscessus ATCC 19977 Gene: MAB_3019: Fatty acid hydroxylase FAH1P	Mycobacterium avium 104	Mycobacterium flavescens PYR-GCK	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_3529: Fatty acid hydroxylase FAH1P	Mycobacterium sp. JLS Gene: Mjls_2758: Fatty acid hydroxylase FAH1P	Mycobacterium tuberculosis H37Rv	Mycobacterium vanbaalenii PYR-1 Gene: Mvan_2943: Fatty acid hydroxylase FAH1P	Fatty acid hydroxylase FAH1P

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Mce2R - Mycobacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --