Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog MSMEG_3264 - Mycobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode:
Biological process: Erythritol utilization; D-threitol utilization
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium abscessus ATCC 19977
Mycobacterium avium 104
Mycobacterium flavescens PYR-GCK
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium smegmatis str. MC2 155 10 2
Mycobacterium sp. JLS 9 2
Mycobacterium tuberculosis H37Rv
Mycobacterium vanbaalenii PYR-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
MSMEG_3264
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -71
score = 5.41305
sequence = TGCACAATTGTCCAGAACATCTGTTCA

Gene: MSMEG_3264: Transcriptional regulator for D-threitol and erythritol utilization, DeoR family
*
Mycobacterium sp. JLS

Site:
position = -73
score = 5.32948
sequence = TGCACATCTGTCCAGAACATCTGTTCA

Site:
position = -60
score = 4.5204
sequence = AGAACATCTGTTCAGGGAGAATCTGTT

Gene: Mjls_2592: Transcriptional regulator for D-threitol and erythritol utilization, DeoR family
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Transcriptional regulator for D-threitol and erythritol utilization, DeoR family
MSMEG_3262
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3262: oxidoreductase, short-chain dehydrogenase-reductase family (kduD)
 
Mycobacterium sp. JLS
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
oxidoreductase, short-chain dehydrogenase-reductase family
 
CRON 2.
MSMEG_3265
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -74
score = 7.63115
sequence = TGAACAGATGTTCTGGACAATTGTGCA

Gene: MSMEG_3265: homolog of sorbitol dehydrogenase
*
Mycobacterium sp. JLS

Site:
position = -71
score = 7.98138
sequence = TGAACAGATGTTCTGGACAGATGTGCA

Gene: Mjls_2593: homolog of sorbitol dehydrogenase
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
homolog of sorbitol dehydrogenase
MSMEG_3266
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3266: Predicted erythritol ABC transporter 1, substrate-binding component
 
Mycobacterium sp. JLS

Gene: Mjls_2594: Predicted erythritol ABC transporter 1, substrate-binding component
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Predicted erythritol ABC transporter 1, substrate-binding component
MSMEG_3267
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3267: Predicted erythritol ABC transporter, permease protein
 
Mycobacterium sp. JLS

Gene: Mjls_2595: Predicted erythritol ABC transporter, permease protein
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Predicted erythritol ABC transporter, permease protein
MSMEG_3268
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3268: Predicted erythritol ABC transporter, permease protein
 
Mycobacterium sp. JLS

Gene: Mjls_2596: Predicted erythritol ABC transporter, permease protein
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Predicted erythritol ABC transporter, permease protein
MSMEG_3269
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3269: Predicted erythritol ABC transporter 1, ATP-binding protein
 
Mycobacterium sp. JLS

Gene: Mjls_2597: Predicted erythritol ABC transporter 1, ATP-binding protein
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Predicted erythritol ABC transporter 1, ATP-binding protein
MSMEG_3270
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3270: Predicted erythritol ABC transporter 1, ATP-binding protein
 
Mycobacterium sp. JLS

Gene: Mjls_2598: Predicted erythritol ABC transporter 1, ATP-binding protein
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Predicted erythritol ABC transporter 1, ATP-binding protein
MSMEG_3271
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3271: D-erythrulose kinase
 
Mycobacterium sp. JLS

Gene: Mjls_2599: D-erythrulose kinase
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
D-erythrulose kinase
MSMEG_3272
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3272: D-erythrulose 4-phosphate isomerase
 
Mycobacterium sp. JLS

Gene: Mjls_2600: D-erythrulose 4-phosphate isomerase
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
D-erythrulose 4-phosphate isomerase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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