Regulog BfrR - Bifidobacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Fructooligosaccharides utilization
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By TF family - LacI
By pathway - Fructooligosaccharides utilization

Statistics of regulated genes
Genome	Genes	Operons
Bifidobacterium longum subsp. infantis ATCC 15697	6	1
Bifidobacterium adolescentis ATCC 15703	6	1
Bifidobacterium angulatum DSM 20098	6	1
Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium bifidum NCIMB 41171
Bifidobacterium breve DSM 20213
Bifidobacterium dentium Bd1
Bifidobacterium gallicum DSM 20093
Bifidobacterium longum NCC2705
Gardnerella vaginalis 409-05

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
bfrB	* Bifidobacterium longum subsp. infantis ATCC 15697 Site: position = -156 score = 5.91169 sequence = TGAGATAAACGATTAACATT Site: position = -135 score = 4.85406 sequence = GACATTAATCGATTAACGTC Gene: Blon_2061: Putative fructooligosaccharide ABC transporter, substrate-binding component	* Bifidobacterium adolescentis ATCC 15703 Site: position = -141 score = 6.02227 sequence = TGAGATAAACGATTAACGTT Site: position = -120 score = 4.85406 sequence = GACATTAAACGATTAACGAT Gene: BAD_1330: Putative fructooligosaccharide ABC transporter, substrate-binding component	* Bifidobacterium angulatum DSM 20098 Site: position = -140 score = 5.63618 sequence = TGGAATAATCGTTTAACGTT Site: position = -119 score = 4.85406 sequence = GACATTAAACGATTAACGAT Gene: BIFANG_00830: Putative fructooligosaccharide ABC transporter, substrate-binding component	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Gardnerella vaginalis 409-05	Putative fructooligosaccharide ABC transporter, substrate-binding component
bfrC	Bifidobacterium longum subsp. infantis ATCC 15697 Gene: Blon_2060: Putative fructooligosaccharide ABC transporter, permease component 1	Bifidobacterium adolescentis ATCC 15703 Gene: BAD_1329: Putative fructooligosaccharide ABC transporter, permease component 1	Bifidobacterium angulatum DSM 20098 Gene: BIFANG_00831: Putative fructooligosaccharide ABC transporter, permease component 1	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Gardnerella vaginalis 409-05	Putative fructooligosaccharide ABC transporter, permease component 1
bfrD	Bifidobacterium longum subsp. infantis ATCC 15697 Gene: Blon_2059: Putative fructooligosaccharide ABC transporter, permease component 2	Bifidobacterium adolescentis ATCC 15703 Gene: BAD_1328: Putative fructooligosaccharide ABC transporter, permease component 2	Bifidobacterium angulatum DSM 20098 Gene: BIFANG_00832: Putative fructooligosaccharide ABC transporter, permease component 2	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Gardnerella vaginalis 409-05	Putative fructooligosaccharide ABC transporter, permease component 2
PF04854	Bifidobacterium longum subsp. infantis ATCC 15697 Gene: Blon_2058: Predicted integral membrane protein, DUF624	Bifidobacterium adolescentis ATCC 15703 Gene: BAD_1327: Predicted integral membrane protein, DUF624	Bifidobacterium angulatum DSM 20098 Gene: BIFANG_00833: Predicted integral membrane protein, DUF624	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Gardnerella vaginalis 409-05	Predicted integral membrane protein, DUF624
bfrR	Bifidobacterium longum subsp. infantis ATCC 15697 Gene: Blon_2057: Putative transcriptional regulator of fructooligosaccharide utilization, LacI-family	Bifidobacterium adolescentis ATCC 15703 Gene: BAD_1326: Putative transcriptional regulator of fructooligosaccharide utilization, LacI-family	Bifidobacterium angulatum DSM 20098 Gene: BIFANG_00834: Putative transcriptional regulator of fructooligosaccharide utilization, LacI-family	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Gardnerella vaginalis 409-05	Putative transcriptional regulator of fructooligosaccharide utilization, LacI-family
bfrA	Bifidobacterium longum subsp. infantis ATCC 15697 Gene: Blon_2056: Beta-fructosidase (EC 3.2.1.26)	Bifidobacterium adolescentis ATCC 15703 Gene: BAD_1325: Beta-fructosidase (EC 3.2.1.26)	Bifidobacterium angulatum DSM 20098 Gene: BIFANG_00835: Beta-fructosidase (EC 3.2.1.26)	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Gardnerella vaginalis 409-05	Beta-fructosidase (EC 3.2.1.26)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog BfrR - Bifidobacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --