Regulog PdxR3 - Mycobacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Mycobacterium abscessus ATCC 19977	1	1
Mycobacterium avium 104
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium tuberculosis H37Rv
Mycobacterium smegmatis str. MC2 155	2	2
Mycobacterium flavescens PYR-GCK	1	1
Mycobacterium sp. JLS	1	1
Mycobacterium vanbaalenii PYR-1	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
COG2364	* Mycobacterium abscessus ATCC 19977 Site: position = -61 score = 14.6045 sequence = AAAGCCAGTGT-(4)-CAACTGGCTAT-(7)-CAAGCCAGTTG Gene: MAB_3386c: putative integral membrane protein	Mycobacterium avium 104	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium tuberculosis H37Rv	2 Mycobacterium smegmatis str. MC2 155* Site: position = -203 score = 15.7153 sequence = GAGGCCAGTAT-(4)-CGACTGGCTAT-(7)-CAAGCCAGATC Gene: MSMEG_2325: putative integral membrane protein Site: position = -203 score = 15.7153 sequence = GAGGCCAGTAT-(4)-CGACTGGCTAT-(7)-CAAGCCAGATC Gene: MSMEG_1045: putative integral membrane protein	* Mycobacterium flavescens PYR-GCK Site: position = -10 score = 14.3268 sequence = GAGGCCAGTAT-(4)-AGACTGGCTAT-(7)-CAAGCCACTTC Gene: Mflv_4274: putative integral membrane protein	* Mycobacterium sp. JLS Site: position = -215 score = 16.0225 sequence = GCAGCCAGTAT-(4)-CAACTGGCTAT-(7)-CAAGCCAGTCG Gene: Mjls_1836: putative integral membrane protein	* Mycobacterium vanbaalenii PYR-1 Site: position = -214 score = 15.3365 sequence = GAGGCCAGTAT-(4)-GAACTGGATAT-(7)-CAAGCCAGATG Gene: Mvan_2085: putative integral membrane protein	putative integral membrane protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --