Regulog DVU2956 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028	9	1
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1	9	1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough	10	1
Desulfovibrio vulgaris str. Miyazaki F	10	2
Lawsonia intracellularis PHE/MN1-00

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU2958	Desulfohalobium retbaense DSM 5692 Gene: Dret_2118: TSUP family protein	* Desulfomicrobium baculatum DSM 4028 Site: position = -169 score = 6.15979 sequence = GCGGCAATATTTTGCCGT Site: position = -348 score = 5.66062 sequence = CCGGCAATTTCTTGCCGG Gene: Dbac_2264: TSUP family protein	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0811: TSUP family protein	* Desulfovibrio magneticus RS-1 Site: position = -346 score = 6.41255 sequence = GCGGCAAAAATTTGCCGC Site: position = -199 score = 5.54573 sequence = GCGGCGAATGTTTGCCGT Site: position = -220 score = 6.29425 sequence = ACGGCAAAAATTTGCCGC Gene: DMR_40120: TSUP family protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00050: TSUP family protein	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -268 score = 5.83669 sequence = GCGGTAATTTTTTGCCGC Gene: DVU2958: TSUP family protein	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -271 score = 5.44567 sequence = GCGGAAAATTTCTGCCGT Site: position = -292 score = 5.66062 sequence = CCGGCAATTTGTTGCCGG Gene: DvMF_1764: TSUP family protein	Lawsonia intracellularis PHE/MN1-00	TSUP family protein
DVU2959	Desulfohalobium retbaense DSM 5692 Gene: Dret_2119: hypothetical membrane protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2265: hypothetical membrane protein	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0812: hypothetical membrane protein	Desulfovibrio magneticus RS-1 Gene: DMR_40110: hypothetical membrane protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00049: hypothetical membrane protein	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2959: hypothetical membrane protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1765: hypothetical membrane protein	Lawsonia intracellularis PHE/MN1-00	hypothetical membrane protein
DVU2960	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2266: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio desulfuricans G20 Gene: Dde_0318: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_40100: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3504: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio vulgaris Hildenborough Gene: DVU2960: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1766: PAS modulated sigma54 specific transcriptional regulator, Fis family	Lawsonia intracellularis PHE/MN1-00	PAS modulated sigma54 specific transcriptional regulator, Fis family
DVU2961	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2267: hypothetical protein	Desulfovibrio desulfuricans G20 Gene: Dde_0319: hypothetical protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_40090: hypothetical protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3505: hypothetical protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2961: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1767: hypothetical protein	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
DVU2962	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2268: Signal transduction histidine kinase	Desulfovibrio desulfuricans G20 Gene: Dde_0320: Signal transduction histidine kinase	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0813: Signal transduction histidine kinase	Desulfovibrio magneticus RS-1 Gene: DMR_40080: Signal transduction histidine kinase	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00048: Signal transduction histidine kinase	Desulfovibrio salexigens DSM 2638 Gene: Desal_1133: Signal transduction histidine kinase	Desulfovibrio vulgaris Hildenborough Gene: DVU2962: Signal transduction histidine kinase	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1768: Signal transduction histidine kinase	Lawsonia intracellularis PHE/MN1-00	Signal transduction histidine kinase
DVU2963	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2269: response regulator receiver protein	Desulfovibrio desulfuricans G20 Gene: Dde_0321: response regulator receiver protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0814: response regulator receiver protein	Desulfovibrio magneticus RS-1 Gene: DMR_40070: response regulator receiver protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00047: response regulator receiver protein	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2963: response regulator receiver protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1769: response regulator receiver protein	Lawsonia intracellularis PHE/MN1-00	response regulator receiver protein
DVU2964	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2270: hypothetical protein	Desulfovibrio desulfuricans G20 Gene: Dde_0322: hypothetical protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0815: hypothetical protein	Desulfovibrio magneticus RS-1 Gene: DMR_40060: hypothetical protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00046: hypothetical protein	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2964: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1770: hypothetical protein	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
DVU2965	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2965: hypothetical protein	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -39 score = 5.64787 sequence = GCGGCAACATTCTGCCGC Gene: DvMF_1771: hypothetical protein	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
DVU2966	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2271: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Desulfovibrio desulfuricans G20 Gene: Dde_0324: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0816: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Desulfovibrio magneticus RS-1 Gene: DMR_40050: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00045: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2966: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1772: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Lawsonia intracellularis PHE/MN1-00	Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
DVU2967	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2272: response regulator receiver sensor signal transduction histidine kinase	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0817: response regulator receiver sensor signal transduction histidine kinase	Desulfovibrio magneticus RS-1 Gene: DMR_40040: response regulator receiver sensor signal transduction histidine kinase	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00044: response regulator receiver sensor signal transduction histidine kinase	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2967: response regulator receiver sensor signal transduction histidine kinase	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1773: response regulator receiver sensor signal transduction histidine kinase	Lawsonia intracellularis PHE/MN1-00	response regulator receiver sensor signal transduction histidine kinase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2956 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --