Regulog DVU0744 - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Fis
| Genome | Genes | Operons |
|---|---|---|
| Desulfohalobium retbaense DSM 5692 | ||
| Desulfomicrobium baculatum DSM 4028 | ||
| Desulfovibrio desulfuricans G20 | 1 | 1 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | ||
| Desulfovibrio magneticus RS-1 | ||
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | ||
| Desulfovibrio vulgaris Hildenborough | 1 | 1 |
| Desulfovibrio vulgaris str. Miyazaki F | 1 | 1 |
| Lawsonia intracellularis PHE/MN1-00 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| DVU0682 |
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Gene: Dbac_1321: DNA-binding protein, putative |
*
Desulfovibrio desulfuricans G20 Site: position = -405 score = 4.19054 sequence = TGTAACA Site: position = -398 score = 3.92096 sequence = TGTGACA Site: position = -439 score = 3.42163 sequence = CGTCACA Site: position = -432 score = 4.19054 sequence = TGTTACA Gene: Dde_2949: DNA-binding protein, putative |
Gene: Ddes_0868: DNA-binding protein, putative |
Gene: DMR_23570: DNA-binding protein, putative |
Gene: DESPIG_03022: DNA-binding protein, putative |
Gene: Desal_0117: DNA-binding protein, putative |
*
Desulfovibrio vulgaris Hildenborough Site: position = -258 score = 3.92096 sequence = TGTGACA Site: position = -280 score = 3.92096 sequence = TGTGACA Site: position = -289 score = 4.19054 sequence = TGTAACA Site: position = -313 score = 4.19054 sequence = TGTTACA Gene: null: DNA-binding protein, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -385 score = 4.19054 sequence = TGTAACA Site: position = -377 score = 3.69121 sequence = TGTTACG Site: position = -352 score = 4.19054 sequence = TGTAACA Site: position = -345 score = 3.69121 sequence = TGTTACG Gene: DvMF_2676: DNA-binding protein, putative |
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DNA-binding protein, putative |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |