Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NagR - Clostridia-1

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: N-acetylglucosamine utilization
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Clostridium acetobutylicum ATCC 824 3 1
Clostridium beijerincki NCIMB 8052
Clostridium botulinum A str. ATCC 3502 3 1
Clostridium butyricum 5521
Clostridium kluyveri DSM 555
Clostridium novyi NT
Clostridium perfringens ATCC 13124 2 1
Clostridium tetani E88
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nagR
*
Clostridium acetobutylicum ATCC 824

Site:
position = -80
score = 5.93888
sequence = AAATTGGTATATACAACATG

Gene: CAC0189: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -202
score = 6.18712
sequence = AAATTGGTATATACAACATA

Gene: CBO2835: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -57
score = 5.49635
sequence = ATAGTGGTCTAGACAAGTTA

Gene: CPF_2745: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Clostridium tetani E88
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
nagA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0188: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2834: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0187: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2833: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2744: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Clostridium tetani E88
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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