Regulog MntR - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	DtxR
Regulation mode:	repressor
Biological process:	Manganese homeostasis
Effector:	Manganese ion, (Mn2+)
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By trascription factor - MntR
By taxonomy - Micrococcineae
By TF family - DtxR
By effector - Manganese ion, (Mn2+)
By pathway - Manganese homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Arthrobacter aurescens TC1	5	3
Arthrobacter chlorophenolicus A6	1	1
Arthrobacter sp. FB24	4	2
Beutenbergia cavernae DSM 12333	4	1
Brachybacterium faecium DSM 4810	3	1
Brevibacterium linens BL2	3	1
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603	3	1
Kocuria rhizophila DC2201	3	1
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07	1	1
Renibacterium salmoninarum ATCC 33209	1	1
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
mtsA	* Arthrobacter aurescens TC1 Site: position = -7 score = 5.43121 sequence = TTTCGGTATGCCTAAC Gene: AAur_3272: Manganese ABC transporter, substrate-binding protein	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -7 score = 4.5 sequence = ATTCGGTATGCCTAAA Site: position = 15 score = 4.63 sequence = TTTCGGTGCGCCAAAG Gene: Arth_3280: Manganese ABC transporter, substrate-binding protein	* Beutenbergia cavernae DSM 12333 Site: position = 2 score = 4.00627 sequence = GTTCGGTGGCCCAAAC Gene: Bcav_1388: Manganese ABC transporter, substrate-binding protein	* Brachybacterium faecium DSM 4810 Site: position = -30 score = 4.03491 sequence = GTGCGGGACAACGAAG Site: position = -53 score = 5.25687 sequence = GTTCGGTGCAACGAAC Gene: Bfae_31330: Manganese ABC transporter, substrate-binding protein	* Brevibacterium linens BL2 Site: position = -16 score = 4.3065 sequence = CGAAGGTAAGCCTCAG Gene: BlinB01000963: Manganese ABC transporter, substrate-binding protein	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	* Jonesia denitrificans DSM 20603 Site: position = -45 score = 4.34703 sequence = GTTCGGACTGCCGAAC Gene: Jden_0297: Manganese ABC transporter, substrate-binding protein	* Kocuria rhizophila DC2201 Site: position = -45 score = 5.70675 sequence = GTTCGGTACACCGAAC Gene: KRH_01300: Manganese ABC transporter, substrate-binding protein	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist Gene: TW662: Manganese ABC transporter, substrate-binding protein	Manganese ABC transporter, substrate-binding protein
mtsB	Arthrobacter aurescens TC1 Gene: AAur_3271: Manganese ABC transporter, ATP-binding protein	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3279: Manganese ABC transporter, ATP-binding protein	Beutenbergia cavernae DSM 12333 Gene: Bcav_1389: Manganese ABC transporter, ATP-binding protein	Brachybacterium faecium DSM 4810 Gene: Bfae_31320: Manganese ABC transporter, ATP-binding protein	Brevibacterium linens BL2 Gene: BlinB01000962: Manganese ABC transporter, ATP-binding protein	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0298: Manganese ABC transporter, ATP-binding protein	Kocuria rhizophila DC2201 Gene: KRH_01290: Manganese ABC transporter, ATP-binding protein	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist Gene: TW663: Manganese ABC transporter, ATP-binding protein	Manganese ABC transporter, ATP-binding protein
mtsC	Arthrobacter aurescens TC1 Gene: AAur_3270: Manganese ABC transporter, permease protein	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3278: Manganese ABC transporter, permease protein	Beutenbergia cavernae DSM 12333 Gene: Bcav_1390: Manganese ABC transporter, permease protein	Brachybacterium faecium DSM 4810 Gene: Bfae_31310: Manganese ABC transporter, permease protein	Brevibacterium linens BL2 Gene: BlinB01000961: Manganese ABC transporter, permease protein	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0299: Manganese ABC transporter, permease protein	Kocuria rhizophila DC2201 Gene: KRH_01280: Manganese ABC transporter, permease protein	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	2 Tropheryma whipplei str. Twist Gene: TW664: Manganese ABC transporter, permease protein Gene: TW761: Manganese ABC transporter, permease protein	Manganese ABC transporter, permease protein
mntR	Arthrobacter aurescens TC1 Gene: AAur_pTC20049: Mn-dependent transcriptional regulator MntR	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -46 score = 4.92605 sequence = GTTCGTTAAGCCTAAC Gene: Arth_4418: Mn-dependent transcriptional regulator MntR	Beutenbergia cavernae DSM 12333 Gene: Bcav_1391: Mn-dependent transcriptional regulator MntR	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01001958: Mn-dependent transcriptional regulator MntR	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_2528: Mn-dependent transcriptional regulator MntR	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_1570: Mn-dependent transcriptional regulator MntR	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07 Gene: Lxx03210: Mn-dependent transcriptional regulator MntR	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Mn-dependent transcriptional regulator MntR

CRON 2.
mntH	2 Arthrobacter aurescens TC1* Site: position = -59 score = 5.43121 sequence = TTTCGGTATGCCTAAC Gene: AAur_pTC20050: Manganese transport protein MntH Site: position = -61 score = 4.34703 sequence = TTTCGGCACGCCTAAA Gene: AAur_pTC10168: Manganese transport protein MntH	* Arthrobacter chlorophenolicus A6 Site: position = -61 score = 4.85219 sequence = TTTCGGTATGCCTAAA Gene: Achl_3070: Manganese transport protein MntH	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01001954: Manganese transport protein MntH	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_2529: Manganese transport protein MntH	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	* Leifsonia xyli subsp. xyli str. CTCB07 Site: position = -62 score = 3.61692 sequence = GTTAGTCTCACCTAAC Gene: Lxx20950: Manganese transport protein MntH	* Renibacterium salmoninarum ATCC 33209 Site: position = -52 score = 4.20926 sequence = TTTCGTTATGCCTAAA Gene: RSal33209_1376: Manganese transport protein MntH	Tropheryma whipplei str. Twist	Manganese transport protein MntH

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MntR - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --