Regulog PdxR2 - Mycobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium abscessus ATCC 19977 | 1 | 1 |
| Mycobacterium avium 104 | ||
| Mycobacterium marinum M | ||
| Mycobacterium leprae TN | ||
| Mycobacterium smegmatis str. MC2 155 | ||
| Mycobacterium tuberculosis H37Rv | ||
| Mycobacterium flavescens PYR-GCK | ||
| Mycobacterium vanbaalenii PYR-1 | ||
| Mycobacterium sp. JLS |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| pdxO |
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Mycobacterium abscessus ATCC 19977 Site: position = -68 score = 12.5959 sequence = ACTGGACTGG-(14)-TGTGGTCTGT-(25)-ATGTGTCACA Gene: MAB_1356: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Gene: MSMEG_4975: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Gene: Mvan_4367: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Gene: Mjls_5579: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |