Regulog PdxR - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:	activator
Biological process:	Pyridoxine biosynthesis
Effector:	Pyridoxal-5-phosphate
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

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Member of regulog collections

By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By trascription factor - PdxR
By TF family - GntR/MocR
By effector - Pyridoxal-5-phosphate
By pathway - Pyridoxine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Actinosynnema mirum DSM 43827
Saccharomonospora viridis DSM 43017
Saccharopolyspora erythraea NRRL 2338
Nakamurella multipartita DSM 44233
Frankia sp. EAN1pec
Acidothermus cellulolyticus 11B
Frankia sp. CcI3
Nocardioides sp. JS614
Propionibacterium acnes KPA171202	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
pdxS	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338	Nakamurella multipartita DSM 44233	Frankia sp. EAN1pec Gene: Franean1_5149: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	Acidothermus cellulolyticus 11B Gene: Acel_1348: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	Frankia sp. CcI3 Gene: Francci3_1366: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	Nocardioides sp. JS614 Gene: Noca_2381: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	* Propionibacterium acnes KPA171202 Site: position = -61 score = 13.6467 sequence = AAAGTGGTCT-(14)-TATATGGATC-(7)-GAACCACAAT Gene: PPA0965: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
pdxT	Actinosynnema mirum DSM 43827 Gene: Amir_2109: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2017: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	2 Nakamurella multipartita DSM 44233 Gene: Namu_2036: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) Gene: Namu_3399: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Frankia sp. EAN1pec Gene: Franean1_5148: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Acidothermus cellulolyticus 11B Gene: Acel_1347: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Frankia sp. CcI3 Gene: Francci3_1367: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Nocardioides sp. JS614 Gene: Noca_2382: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Propionibacterium acnes KPA171202 Gene: PPA0966: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PdxR - Frankineae/Propionibacterineae/Pseudonocardiaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --