Regulog YrdX3 - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Acetobacter pasteurianus IFO 3283-01 | 6 | 1 |
| Azospirillum sp. B510 | ||
| Gluconacetobacter diazotrophicus PAl 5 | 8 | 1 |
| Gluconobacter oxydans 621H | ||
| Granulibacter bethesdensis CGDNIH1 | ||
| Magnetospirillum magneticum AMB-1 | ||
| Magnetospirillum magnetotacticum MS-1 | ||
| Rhodospirillum centenum SW | ||
| Rhodospirillum rubrum ATCC 11170 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| APA01_41670 |
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Acetobacter pasteurianus IFO 3283-01 Site: position = -196 score = 17.7033 sequence = TTGTATGT-(14)-TTGTATGT-(45)-TTGTACTT-(10)-ACATACAA Gene: APA01_41670: hypothetical protein |
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Gluconacetobacter diazotrophicus PAl 5 Site: position = -160 score = 17.7033 sequence = TTGTTTCC-(13)-TTGTATGG-(44)-TTGTATGG-(10)-CCATACAA Gene: Gdia_2618: hypothetical protein |
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hypothetical protein |
| COG388 |
Gene: APA01_41660: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) |
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Gene: Gdia_2619: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) |
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Gene: Magn03001874: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) |
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Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) |
| COG2516 |
Gene: APA01_41650: Biotin synthase-related radical SAM domain protein |
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Gene: Gdia_2620: Biotin synthase-related radical SAM domain protein |
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Gene: Magn03001875: Biotin synthase-related radical SAM domain protein |
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Biotin synthase-related radical SAM domain protein |
| APA01_41640 |
Gene: APA01_41640: GCN5-related N-acetyltransferase |
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Gene: Gdia_2621: GCN5-related N-acetyltransferase |
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GCN5-related N-acetyltransferase |
| COG2144 |
Gene: APA01_41630: AIR synthase related protein/Selenophosphate synthetase-related |
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Gene: Gdia_2622: AIR synthase related protein/Selenophosphate synthetase-related |
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AIR synthase related protein/Selenophosphate synthetase-related |
| rfaG |
Gene: APA01_41620: Glycosyltransferase |
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Gene: Gdia_2623: Glycosyltransferase |
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Glycosyltransferase |
| Gdia_2624 |
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Gene: Gdia_2624: hypothetical protein |
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hypothetical protein |
| trkA |
Gene: APA01_41610: FAD dependent oxidoreductase |
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Gene: Gdia_2625: FAD dependent oxidoreductase |
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FAD dependent oxidoreductase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |