Regulog Gdia_0881 - Rhodospirillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Acetobacter pasteurianus IFO 3283-01
Azospirillum sp. B510
Magnetospirillum magneticum AMB-1
Magnetospirillum magnetotacticum MS-1
Rhodospirillum centenum SW
Rhodospirillum rubrum ATCC 11170
Granulibacter bethesdensis CGDNIH1
Gluconobacter oxydans 621H
Gluconacetobacter diazotrophicus PAl 5	7	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
AZL_a06310	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510 Gene: AZL_a06310: 3-hydroxybutyrate dehydrogenase	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	* Gluconacetobacter diazotrophicus PAl 5 Site: position = -57 score = 5.16028 sequence = ATTGGCCGGACCAAT Site: position = -78 score = 5.14264 sequence = ATTGGTCTGACCAAT Gene: Gdia_0880: 3-hydroxybutyrate dehydrogenase	3-hydroxybutyrate dehydrogenase
mhpD	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0879: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase	5-carboxymethyl-2-hydroxymuconate Delta-isomerase
COG4948	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0878: Mandelate racemase/muconate lactonizing protein	Mandelate racemase/muconate lactonizing protein
Gdia_0877	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0877: short-chain dehydrogenase/reductase SDR	short-chain dehydrogenase/reductase SDR
Gdia_0876	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0876: RbsD or FucU transporter	RbsD or FucU transporter
Gdia_0875	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0875: amidohydrolase 2	amidohydrolase 2

CRON 2.
Gdia_0881	Acetobacter pasteurianus IFO 3283-01	Azospirillum sp. B510	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Granulibacter bethesdensis CGDNIH1	Gluconobacter oxydans 621H	* Gluconacetobacter diazotrophicus PAl 5 Site: position = -94 score = 5.16028 sequence = ATTGGTCCGGCCAAT Site: position = -73 score = 5.14264 sequence = ATTGGTCAGACCAAT Gene: Gdia_0881: Transcription regulator, GntR family	Transcription regulator, GntR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Gdia_0881 - Rhodospirillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --