Regulog RHA1_ro08093 - Nocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Nocardia farcinica IFM 10152
Rhodococcus erythropolis PR4
Rhodococcus opacus B4
Rhodococcus sp. RHA1	6	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
RHA1_ro08092	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	2 Rhodococcus sp. RHA1* Site: position = -99 score = 13.6724 sequence = ATCGGTACC-(15)-ATTGGATCT-(2)-TGAACCGCT Gene: RHA1_ro08092: hypothetical protein Site: position = -83 score = 13.6753 sequence = ACCGGTACC-(15)-ATTGGATCT-(2)-TGGACCGCT Gene: RHA1_ro08097: hypothetical protein	hypothetical protein
RHA1_ro08091	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1 Gene: RHA1_ro08091: hypothetical protein	hypothetical protein
aldH1	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	2 Rhodococcus sp. RHA1 Gene: RHA1_ro08090: Aldehyde dehydrogenase (EC 1.2.1.3) Gene: RHA1_ro05244: Aldehyde dehydrogenase (EC 1.2.1.3)	Aldehyde dehydrogenase (EC 1.2.1.3)
RHA1_ro08089	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1 Gene: RHA1_ro08089: hypothetical protein	hypothetical protein
RHA1_ro08096	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1 Gene: RHA1_ro08096: hypothetical protein	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --