Regulog PdxW - Rhodospirillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Magnetospirillum magneticum AMB-1	1	1
Magnetospirillum magnetotacticum MS-1	1	1
Rhodospirillum centenum SW
Rhodospirillum rubrum ATCC 11170
Azospirillum sp. B510
Acetobacter pasteurianus IFO 3283-01
Gluconacetobacter diazotrophicus PAl 5
Gluconobacter oxydans 621H
Granulibacter bethesdensis CGDNIH1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
pdxO	* Magnetospirillum magneticum AMB-1 Site: position = -241 score = 14.4765 sequence = AAGTGGCTC-(14)-AAGTGGATC-(8)-GAGCCACTT Gene: amb1377: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Magnetospirillum magnetotacticum MS-1 Site: position = -84 score = 14.4765 sequence = AAGTGGCTC-(14)-AACTGGGCC-(8)-GAACCGCTT Gene: Magn03008367: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170	Azospirillum sp. B510 Gene: AZL_a00360: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Acetobacter pasteurianus IFO 3283-01	Gluconacetobacter diazotrophicus PAl 5	Gluconobacter oxydans 621H	Granulibacter bethesdensis CGDNIH1	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --