Regulog PdxQ - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Desulfovibrio vulgaris Hildenborough
Desulfovibrio vulgaris str. Miyazaki F	1	1
Lawsonia intracellularis PHE/MN1-00
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	1	1
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
pdxO	Desulfovibrio vulgaris Hildenborough	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -81 score = 9.43261 sequence = CTGTCC-(19)-TTGCAC-(9)-GGACAG Gene: DvMF_3004: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Lawsonia intracellularis PHE/MN1-00	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -68 score = 9.25713 sequence = CTGTCC-(14)-CTGTTT-(14)-GGTCAA Gene: Ddes_1163: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --