Regulog PdxR2 - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Azorhizobium caulinodans ORS 571 | ||
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | ||
| Brucella melitensis 16M | ||
| Mesorhizobium loti MAFF303099 | ||
| Mesorhizobium sp. BNC1 | ||
| Nitrobacter winogradskyi Nb-255 | 2 | 1 |
| Rhizobium etli CFN 42 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium sp. NGR234 | ||
| Rhodopseudomonas palustris CGA009 | ||
| Sinorhizobium meliloti 1021 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| PF00596 |
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Nitrobacter winogradskyi Nb-255 Site: position = -263 score = 14.1963 sequence = ACCGGCCTA-(14)-ACTGGCACT-(6)-TAGGCCGGT Gene: Nwi_0882: class II aldolase/adducin |
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class II aldolase/adducin |
| PF00701 |
Gene: Atu0899: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: AZC_2692: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: mll6376: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: Nwi_0883: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: RHE_CH02792: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: RL3247: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: NGR_b00160: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: SMb21508: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Dihydrodipicolinate synthase (EC 4.2.1.52) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |