Regulog PdxR2 - Sphingomonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Erythrobacter litoralis HTCC2594
Erythrobacter sp. NAP1
Novosphingobium aromaticivorans DSM 12444
Sphingobium japonicum UT26S
Sphingomonas wittichii RW1
Sphingopyxis alaskensis RB2256
Zymomonas mobilis subsp. mobilis ZM4	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes								Function

CRON 1.
PF00117	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1	Sphingopyxis alaskensis RB2256	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -132 score = 14.3738 sequence = ACTGGCCTA-(14)-ACTGGCACT-(6)-AGAGCCGGT Gene: ZMO1855: Glutamine amidotransferase class-I	Glutamine amidotransferase class-I

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --