Regulog PdxR2 - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine biosynthesis |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Hyphomonas neptunium ATCC 15444 | ||
| Jannaschia sp. CCS1 | ||
| Loktanella vestfoldensis SKA53 | ||
| Oceanicaulis alexandrii HTCC2633 | ||
| Oceanicola batsensis HTCC2597 | ||
| Oceanicola granulosus HTCC2516 | ||
| Paracoccus denitrificans PD1222 | 3 | 1 |
| Rhodobacter sphaeroides 2.4.1 | 2 | 1 |
| Rhodobacterales bacterium HTCC2654 | ||
| Roseobacter sp. MED193 | ||
| Roseovarius nubinhibens ISM | ||
| Roseovarius sp. 217 | ||
| Silicibacter TM1040 | ||
| Silicibacter pomeroyi DSS-3 | ||
| Sulfitobacter sp. EE-36 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| PF00117 |
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Paracoccus denitrificans PD1222 Site: position = -86 score = 14.1963 sequence = ACCGGCCTA-(14)-ACTGGCACT-(6)-TAGGCCAGT Gene: Pden_1435: Glutamine amidotransferase class-I |
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Glutamine amidotransferase class-I |
| PF03473 |
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2
Paracoccus denitrificans PD1222 Gene: Pden_1436: Molybdenum cofactor sulfurase, C-terminal Gene: Pden_4456: Molybdenum cofactor sulfurase, C-terminal |
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Rhodobacter sphaeroides 2.4.1 Site: position = -165 score = 8.69192 sequence = TCCGGCCAC-(14)-TCGAGCACT-(6)-TGGGCCAGA Site: position = -385 score = 14.1963 sequence = ACCGGCCTA-(14)-ACTGGCACT-(6)-CAGGCCAGT Gene: RSP_1921: Molybdenum cofactor sulfurase, C-terminal |
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Molybdenum cofactor sulfurase, C-terminal |
| pdxK |
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2
Paracoccus denitrificans PD1222 Gene: Pden_1437: Pyridoxal kinase (EC 2.7.1.35) Gene: Pden_4457: Pyridoxal kinase (EC 2.7.1.35) |
Gene: RSP_1920: Pyridoxal kinase (EC 2.7.1.35) |
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Pyridoxal kinase (EC 2.7.1.35) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |