Regulog VV21354 - Vibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Photobacterium profundum SS9
Vibrio angustum S14	1	1
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio fischeri ES114
Vibrio harveyi ATCC BAA-1116
Vibrio parahaemolyticus RIMD 2210633
Vibrio salmonicida LFI1238
Vibrio shilonii AK1
Vibrio splendidus LGP32	1	1
Vibrio vulnificus CMCP6	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
PF00892	Photobacterium profundum SS9	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116	Vibrio parahaemolyticus RIMD 2210633	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	* Vibrio splendidus LGP32 Site: position = 24 score = 9.35547 sequence = AACTGTACTGG-(19)-ATCTGTACTGG Gene: VS_1722: Permease of the drug/metabolite transporter (DMT) superfamily	* Vibrio vulnificus CMCP6 Site: position = -152 score = 9.10415 sequence = AACTGTACTGG-(19)-ATCTGTACCGT Gene: VV21355: Permease of the drug/metabolite transporter (DMT) superfamily	Permease of the drug/metabolite transporter (DMT) superfamily

CRON 2.
VAS14_03563	Photobacterium profundum SS9	* Vibrio angustum S14 Site: position = -89 score = 7.84526 sequence = ACCTGTATTGG-(19)-ATCTGTATTGG Gene: VAS14_03563: hypothetical protein	Vibrio cholerae O1 biovar eltor str. N16961	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116	Vibrio parahaemolyticus RIMD 2210633	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --