Regulog OapR - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/MocR
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | ||
| Burkholderia glumae BGR1 | ||
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia phymatum STM815 | 1 | 1 |
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | ||
| Burkholderia vietnamiensis G4 | ||
| Burkholderia xenovorans LB400 | 1 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| oapT |
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Burkholderia phymatum STM815 Site: position = -116 score = 14.506 sequence = ACCAGCACAGTC-(11)-ACCAGCACAGTT-(16)-AACTGTTTATGT Gene: Bphy_4468: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
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Burkholderia xenovorans LB400 Site: position = -143 score = 15.1584 sequence = ATCGGCACAGTT-(11)-ACCAACACAGTT-(16)-AACTGTTTATGC Gene: Bxe_B0670: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |