Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog VEA_000881 - Vibrionales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 7 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio salmonicida LFI1238 1 1
Vibrio shilonii AK1
Vibrio vulnificus CMCP6 1 1
Vibrio splendidus LGP32 1 1
Vibrio parahaemolyticus RIMD 2210633 1 1
Vibrio harveyi ATCC BAA-1116 1 1
Vibrio fischeri ES114
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio angustum S14 1 1
Photobacterium profundum SS9 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF00892
*
Vibrio salmonicida LFI1238

Site:
position = -93
score = 14.2438
sequence = ATCTGTACCCA-(13)-AACTGTCTCTT-(8)-AGCTGTGCCTA

Gene: VSAL_II0946: Permeases of the drug/metabolite transporter (DMT) superfamily
 
Vibrio shilonii AK1
*
Vibrio vulnificus CMCP6

Site:
position = -99
score = 15.5812
sequence = ATCTGTACCCA-(13)-AACTGTCTCTT-(8)-TTCTGTACCCA

Gene: VV21402: Permeases of the drug/metabolite transporter (DMT) superfamily
*
Vibrio splendidus LGP32

Site:
position = -97
score = 15.472
sequence = ATCTGTAACCA-(13)-ATCTGTATCTT-(8)-ATCTGTACCCA

Gene: VS_II1305: Permeases of the drug/metabolite transporter (DMT) superfamily
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -104
score = 15.8524
sequence = ATCTGTACCCA-(13)-ATCTGTCACTT-(8)-CACTGTACCTA

Gene: VPA0119: Permeases of the drug/metabolite transporter (DMT) superfamily
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -122
score = 15.8524
sequence = ATCTGTACCCA-(13)-ATCTGTCACTT-(8)-CACTGTACCTA

Gene: VIBHAR_06857: Permeases of the drug/metabolite transporter (DMT) superfamily
 
Vibrio fischeri ES114
 
Vibrio cholerae O1 biovar eltor str. N16961
*
Vibrio angustum S14

Site:
position = -105
score = 14.4475
sequence = ATCTGTACCCA-(13)-CTCTGTAACTT-(7)-ATCTGCACCAA

Gene: VAS14_15729: Permeases of the drug/metabolite transporter (DMT) superfamily
*
Photobacterium profundum SS9

Site:
position = -94
score = 15.0169
sequence = ATCTGTACCCA-(13)-AACTATCCCTT-(8)-TACTGTACCCA

Gene: PBPRA2307: Permeases of the drug/metabolite transporter (DMT) superfamily
Permeases of the drug/metabolite transporter (DMT) superfamily
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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