Regulog PdxR - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
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| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Azorhizobium caulinodans ORS 571 | ||
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | ||
| Brucella melitensis 16M | ||
| Mesorhizobium loti MAFF303099 | ||
| Mesorhizobium sp. BNC1 | 1 | 1 |
| Nitrobacter winogradskyi Nb-255 | ||
| Rhizobium etli CFN 42 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium sp. NGR234 | ||
| Rhodopseudomonas palustris CGA009 | 4 | 2 |
| Sinorhizobium meliloti 1021 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| glyA |
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Rhodopseudomonas palustris CGA009 Site: position = -128 score = 10.4525 sequence = AATTGGTTGG-(13)-AAGTGGAAGG-(6)-CAGACCACGC Gene: RPA2796: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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Serine hydroxymethyltransferase (EC 2.1.2.1) |
| PF01168 |
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Gene: RPA2795: PLP-binding protein involved in PLP homeostasis |
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PLP-binding protein involved in PLP homeostasis |
| CRON 2. | ||||||||||||||||
| PF03594 |
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Rhodopseudomonas palustris CGA009 Site: position = -58 score = 13.4421 sequence = AAATGGTCTG-(13)-TAATGGAGGG-(6)-CAGGCCACCG Gene: RPA2798: Putative pyridoxine transport protein |
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Putative pyridoxine transport protein |
| pdxK |
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Gene: blr4233: Pyridoxal kinase (EC 2.7.1.35) |
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Gene: RPA2799: Pyridoxal kinase (EC 2.7.1.35) |
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Pyridoxal kinase (EC 2.7.1.35) |
| CRON 3. | ||||||||||||||||
| PdxR |
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Mesorhizobium sp. BNC1 Site: position = -70 score = 8.27576 sequence = ACATGCCTTG-(13)-CAATGGCCTG-(6)-CCTGCCAATT Gene: Meso_4362: Transcriptional regulator for pyridoxine/pyridoxal homeostasis, GntR/MocR family |
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Gene: RPA2797: Transcriptional regulator for pyridoxine/pyridoxal homeostasis, GntR/MocR family |
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Transcriptional regulator for pyridoxine/pyridoxal homeostasis, GntR/MocR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |