Regulog PdxR - Various betaproteobacteria
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
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| Azoarcus sp. EbN1 | ||
| Dechloromonas aromatica RCB | ||
| Thauera sp. MZ1T | 5 | 1 |
| Chromobacterium violaceum ATCC 12472 | ||
| Laribacter hongkongensis HLHK9 | ||
| Neisseria meningitidis MC58 | ||
| Thiobacillus denitrificans | ||
| Nitrosospira multiformis ATCC 25196 | ||
| Nitrosomonas europaea ATCC 19718 | ||
| Methylotenera mobilis JLW8 | ||
| Methylophilales bacterium HTCC2181 | ||
| Methylobacillus flagellatus KT |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| PF03594 |
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Thauera sp. MZ1T Site: position = -113 score = 13.5615 sequence = AATTGGCCGG-(13)-AAGTGGTGGG-(6)-CGGGCCATTT Gene: Tmz1t_0985: Putative pyridoxine transport protein |
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Putative pyridoxine transport protein |
| PF01168 |
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Gene: Tmz1t_0984: PLP-binding protein involved in PLP homeostasis |
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PLP-binding protein involved in PLP homeostasis |
| PF00117 |
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Gene: Tmz1t_0983: Glutamine amidotransferase type 1 |
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Glutamine amidotransferase type 1 |
| PF00202 |
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Gene: Tmz1t_0982: Pyridoxal phosphate-dependent transferase |
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Pyridoxal phosphate-dependent transferase |
| glyA |
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Gene: Tmz1t_0981: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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Serine hydroxymethyltransferase (EC 2.1.2.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |